RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, humanhuman

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-205ENST00000497282 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.73
EFNA1-205ENST00000497282 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
EFNA1-205ENST00000497282 ABCC9O60706 1549 aa16.91■□□□□ 0.3
EFNA1-205ENST00000497282 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
EFNA1-205ENST00000497282 NACADO15069 1562 aa16.3■□□□□ 0.2
EFNA1-205ENST00000497282 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
EFNA1-205ENST00000497282 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
EFNA1-205ENST00000497282 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
EFNA1-205ENST00000497282 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
EFNA1-205ENST00000497282 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
EFNA1-205ENST00000497282 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
EFNA1-205ENST00000497282 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
EFNA1-205ENST00000497282 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
EFNA1-205ENST00000497282 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
EFNA1-205ENST00000497282 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
EFNA1-205ENST00000497282 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
EFNA1-205ENST00000497282 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
EFNA1-205ENST00000497282 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.03
EFNA1-205ENST00000497282 SMARCA4P51532 1647 aa15.21■□□□□ 0.02
EFNA1-205ENST00000497282 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
EFNA1-205ENST00000497282 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
EFNA1-205ENST00000497282 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
EFNA1-205ENST00000497282 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
EFNA1-205ENST00000497282 SMARCA2P51531 1590 aa15.04■□□□□ -0
EFNA1-205ENST00000497282 NCAPD3P42695 1498 aa15.02■□□□□ -0
EFNA1-205ENST00000497282 HMGXB3Q12766 1538 aa15□□□□□ -0.01
EFNA1-205ENST00000497282 WIZO95785 1651 aa14.98□□□□□ -0.01
EFNA1-205ENST00000497282 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
EFNA1-205ENST00000497282 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
EFNA1-205ENST00000497282 TOP2AP11388 1531 aaKnown RBP14.8□□□□□ -0.04
EFNA1-205ENST00000497282 NESP48681 1621 aa14.68□□□□□ -0.06
EFNA1-205ENST00000497282 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
EFNA1-205ENST00000497282 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
EFNA1-205ENST00000497282 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
EFNA1-205ENST00000497282 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
EFNA1-205ENST00000497282 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
EFNA1-205ENST00000497282 CFTRP13569 1480 aa14.53□□□□□ -0.08
EFNA1-205ENST00000497282 ERCC6Q03468 1493 aa14.52□□□□□ -0.08
EFNA1-205ENST00000497282 PRDM2Q13029 1718 aa14.52□□□□□ -0.09
EFNA1-205ENST00000497282 THOC2Q8NI27 1593 aaKnown RBP14.48□□□□□ -0.09
EFNA1-205ENST00000497282 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
EFNA1-205ENST00000497282 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
EFNA1-205ENST00000497282 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
EFNA1-205ENST00000497282 MRC2Q9UBG0 1479 aa14.37□□□□□ -0.11
EFNA1-205ENST00000497282 CUX2O14529 1486 aa14.36□□□□□ -0.11
EFNA1-205ENST00000497282 WDR62O43379 1518 aa14.35□□□□□ -0.11
EFNA1-205ENST00000497282 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
EFNA1-205ENST00000497282 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
EFNA1-205ENST00000497282 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
EFNA1-205ENST00000497282 CUX1P39880 1505 aa14.18□□□□□ -0.14
EFNA1-205ENST00000497282 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
EFNA1-205ENST00000497282 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
EFNA1-205ENST00000497282 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
EFNA1-205ENST00000497282 TARBP1Q13395 1621 aaKnown RBP14.1□□□□□ -0.15
EFNA1-205ENST00000497282 BIVM-ERCC5R4GMW8 1640 aa14.1□□□□□ -0.15
EFNA1-205ENST00000497282 FGD5Q6ZNL6 1462 aa14.1□□□□□ -0.15
EFNA1-205ENST00000497282 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
EFNA1-205ENST00000497282 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
EFNA1-205ENST00000497282 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
EFNA1-205ENST00000497282 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
EFNA1-205ENST00000497282 WDR97A6NE52 1622 aa14.05□□□□□ -0.16
EFNA1-205ENST00000497282 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
EFNA1-205ENST00000497282 EIF4G3O43432 1585 aaKnown RBP14.04□□□□□ -0.16
EFNA1-205ENST00000497282 SOGA1O94964 1423 aa14.01□□□□□ -0.17
EFNA1-205ENST00000497282 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
EFNA1-205ENST00000497282 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.182e-11■■■■■ 43.7
EFNA1-205ENST00000497282 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
EFNA1-205ENST00000497282 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
EFNA1-205ENST00000497282 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
EFNA1-205ENST00000497282 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
EFNA1-205ENST00000497282 CHD1O14646 1710 aa13.85□□□□□ -0.19
EFNA1-205ENST00000497282 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
EFNA1-205ENST00000497282 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
EFNA1-205ENST00000497282 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
EFNA1-205ENST00000497282 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
EFNA1-205ENST00000497282 ERICH3Q5RHP9 1530 aa13.79□□□□□ -0.2
EFNA1-205ENST00000497282 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
EFNA1-205ENST00000497282 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
EFNA1-205ENST00000497282 KIF27Q86VH2 1401 aa13.74□□□□□ -0.21
EFNA1-205ENST00000497282 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
EFNA1-205ENST00000497282 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
EFNA1-205ENST00000497282 CUL7Q14999 1698 aa13.71□□□□□ -0.21
EFNA1-205ENST00000497282 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
EFNA1-205ENST00000497282 FHAD1B1AJZ9 1412 aa13.7□□□□□ -0.22
EFNA1-205ENST00000497282 FBLN2P98095 1184 aa13.69□□□□□ -0.22
EFNA1-205ENST00000497282 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
EFNA1-205ENST00000497282 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
EFNA1-205ENST00000497282 IGF1RP08069 1367 aa13.68□□□□□ -0.22
EFNA1-205ENST00000497282 CEP170Q5SW79 1584 aa13.67□□□□□ -0.22
EFNA1-205ENST00000497282 CHIC1Q5VXU3 224 aa13.66□□□□□ -0.22
EFNA1-205ENST00000497282 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
EFNA1-205ENST00000497282 NUP160Q12769 1436 aa13.64□□□□□ -0.23
EFNA1-205ENST00000497282 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
EFNA1-205ENST00000497282 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
EFNA1-205ENST00000497282 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
EFNA1-205ENST00000497282 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.23
EFNA1-205ENST00000497282 ARHGEF11O15085 1522 aa13.58□□□□□ -0.24
EFNA1-205ENST00000497282 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
EFNA1-205ENST00000497282 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
EFNA1-205ENST00000497282 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms