RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
TM9SF1-207ENST00000528895 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
TM9SF1-207ENST00000528895 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
TM9SF1-207ENST00000528895 ABCC9O60706 1549 aa23.65■■□□□ 1.38
TM9SF1-207ENST00000528895 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
TM9SF1-207ENST00000528895 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
TM9SF1-207ENST00000528895 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
TM9SF1-207ENST00000528895 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
TM9SF1-207ENST00000528895 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
TM9SF1-207ENST00000528895 NACADO15069 1562 aa22.62■■□□□ 1.21
TM9SF1-207ENST00000528895 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
TM9SF1-207ENST00000528895 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
TM9SF1-207ENST00000528895 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
TM9SF1-207ENST00000528895 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
TM9SF1-207ENST00000528895 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
TM9SF1-207ENST00000528895 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
TM9SF1-207ENST00000528895 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
TM9SF1-207ENST00000528895 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
TM9SF1-207ENST00000528895 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
TM9SF1-207ENST00000528895 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
TM9SF1-207ENST00000528895 EIF4G1Q04637 1599 aaKnown RBP21.29■■□□□ 1
TM9SF1-207ENST00000528895 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
TM9SF1-207ENST00000528895 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
TM9SF1-207ENST00000528895 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
TM9SF1-207ENST00000528895 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
TM9SF1-207ENST00000528895 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
TM9SF1-207ENST00000528895 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
TM9SF1-207ENST00000528895 WIZO95785 1651 aa20.98■□□□□ 0.95
TM9SF1-207ENST00000528895 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
TM9SF1-207ENST00000528895 TOP2AP11388 1531 aaKnown RBP20.84■□□□□ 0.93
TM9SF1-207ENST00000528895 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
TM9SF1-207ENST00000528895 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.93
TM9SF1-207ENST00000528895 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
TM9SF1-207ENST00000528895 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
TM9SF1-207ENST00000528895 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
TM9SF1-207ENST00000528895 CUX2O14529 1486 aa20.5■□□□□ 0.87
TM9SF1-207ENST00000528895 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
TM9SF1-207ENST00000528895 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
TM9SF1-207ENST00000528895 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
TM9SF1-207ENST00000528895 NESP48681 1621 aa20.27■□□□□ 0.83
TM9SF1-207ENST00000528895 CFTRP13569 1480 aa20.25■□□□□ 0.83
TM9SF1-207ENST00000528895 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
TM9SF1-207ENST00000528895 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
TM9SF1-207ENST00000528895 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
TM9SF1-207ENST00000528895 THOC2Q8NI27 1593 aaKnown RBP20.16■□□□□ 0.82
TM9SF1-207ENST00000528895 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
TM9SF1-207ENST00000528895 KIF21AQ7Z4S6 1674 aa20.04■□□□□ 0.8
TM9SF1-207ENST00000528895 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
TM9SF1-207ENST00000528895 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
TM9SF1-207ENST00000528895 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
TM9SF1-207ENST00000528895 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
TM9SF1-207ENST00000528895 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
TM9SF1-207ENST00000528895 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
TM9SF1-207ENST00000528895 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
TM9SF1-207ENST00000528895 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
TM9SF1-207ENST00000528895 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
TM9SF1-207ENST00000528895 CUX1P39880 1505 aa19.84■□□□□ 0.77
TM9SF1-207ENST00000528895 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
TM9SF1-207ENST00000528895 WDR62O43379 1518 aa19.81■□□□□ 0.76
TM9SF1-207ENST00000528895 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
TM9SF1-207ENST00000528895 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
TM9SF1-207ENST00000528895 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
TM9SF1-207ENST00000528895 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
TM9SF1-207ENST00000528895 EEA1Q15075 1411 aa19.56■□□□□ 0.72
TM9SF1-207ENST00000528895 SOGA1O94964 1423 aa19.55■□□□□ 0.72
TM9SF1-207ENST00000528895 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
TM9SF1-207ENST00000528895 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
TM9SF1-207ENST00000528895 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
TM9SF1-207ENST00000528895 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
TM9SF1-207ENST00000528895 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
TM9SF1-207ENST00000528895 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
TM9SF1-207ENST00000528895 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
TM9SF1-207ENST00000528895 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
TM9SF1-207ENST00000528895 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
TM9SF1-207ENST00000528895 FAM9AQ8IZU1 332 aaPredicted RBP19.39■□□□□ 0.69
TM9SF1-207ENST00000528895 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
TM9SF1-207ENST00000528895 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
TM9SF1-207ENST00000528895 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
TM9SF1-207ENST00000528895 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
TM9SF1-207ENST00000528895 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
TM9SF1-207ENST00000528895 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
TM9SF1-207ENST00000528895 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.68
TM9SF1-207ENST00000528895 CUL7Q14999 1698 aa19.32■□□□□ 0.68
TM9SF1-207ENST00000528895 RIMBP3CA6NJZ7 1639 aa19.31■□□□□ 0.68
TM9SF1-207ENST00000528895 RIMBP3BA6NNM3 1639 aa19.31■□□□□ 0.68
TM9SF1-207ENST00000528895 RIMBP3Q9UFD9 1639 aa19.31■□□□□ 0.68
TM9SF1-207ENST00000528895 KIF21BO75037 1637 aa19.3■□□□□ 0.68
TM9SF1-207ENST00000528895 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
TM9SF1-207ENST00000528895 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
TM9SF1-207ENST00000528895 IGF1RP08069 1367 aa19.26■□□□□ 0.67
TM9SF1-207ENST00000528895 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
TM9SF1-207ENST00000528895 PRXQ9BXM0 1461 aa19.24■□□□□ 0.67
TM9SF1-207ENST00000528895 ARHGEF11O15085 1522 aa19.22■□□□□ 0.67
TM9SF1-207ENST00000528895 ADAMTS12P58397 1594 aa19.22■□□□□ 0.67
TM9SF1-207ENST00000528895 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
TM9SF1-207ENST00000528895 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
TM9SF1-207ENST00000528895 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
TM9SF1-207ENST00000528895 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
TM9SF1-207ENST00000528895 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
TM9SF1-207ENST00000528895 CHD1O14646 1710 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms