RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
PRKCSH-219ENST00000593101 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
PRKCSH-219ENST00000593101 ABCC9O60706 1549 aa30.96■■■□□ 2.55
PRKCSH-219ENST00000593101 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
PRKCSH-219ENST00000593101 ZCCHC6Q5VYS8 1495 aaKnown RBP30.43■■■□□ 2.46
PRKCSH-219ENST00000593101 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
PRKCSH-219ENST00000593101 NACADO15069 1562 aa30.08■■■□□ 2.41
PRKCSH-219ENST00000593101 MYO15BQ96JP2 1530 aa30.03■■■□□ 2.4
PRKCSH-219ENST00000593101 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
PRKCSH-219ENST00000593101 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
PRKCSH-219ENST00000593101 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
PRKCSH-219ENST00000593101 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
PRKCSH-219ENST00000593101 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.25
PRKCSH-219ENST00000593101 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.24
PRKCSH-219ENST00000593101 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
PRKCSH-219ENST00000593101 EIF4G1Q04637 1599 aaKnown RBP28.23■■■□□ 2.11
PRKCSH-219ENST00000593101 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
PRKCSH-219ENST00000593101 SMARCA4P51532 1647 aa28.13■■■□□ 2.09
PRKCSH-219ENST00000593101 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
PRKCSH-219ENST00000593101 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
PRKCSH-219ENST00000593101 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
PRKCSH-219ENST00000593101 DNAJC5BQ9UF47 199 aa27.93■■■□□ 2.06
PRKCSH-219ENST00000593101 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
PRKCSH-219ENST00000593101 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
PRKCSH-219ENST00000593101 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
PRKCSH-219ENST00000593101 WIZO95785 1651 aa27.83■■■□□ 2.05
PRKCSH-219ENST00000593101 PEG3Q9GZU2 1588 aa27.81■■■□□ 2.04
PRKCSH-219ENST00000593101 NCAPD3P42695 1498 aa27.76■■■□□ 2.03
PRKCSH-219ENST00000593101 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
PRKCSH-219ENST00000593101 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
PRKCSH-219ENST00000593101 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
PRKCSH-219ENST00000593101 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
PRKCSH-219ENST00000593101 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
PRKCSH-219ENST00000593101 NESP48681 1621 aa26.94■■□□□ 1.9
PRKCSH-219ENST00000593101 CFTRP13569 1480 aa26.93■■□□□ 1.9
PRKCSH-219ENST00000593101 LAMC3Q9Y6N6 1575 aa26.92■■□□□ 1.9
PRKCSH-219ENST00000593101 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
PRKCSH-219ENST00000593101 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
PRKCSH-219ENST00000593101 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
PRKCSH-219ENST00000593101 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
PRKCSH-219ENST00000593101 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
PRKCSH-219ENST00000593101 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
PRKCSH-219ENST00000593101 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
PRKCSH-219ENST00000593101 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
PRKCSH-219ENST00000593101 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.82
PRKCSH-219ENST00000593101 URB2Q14146 1524 aaKnown RBP26.37■■□□□ 1.81
PRKCSH-219ENST00000593101 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
PRKCSH-219ENST00000593101 CUX1P39880 1505 aa26.32■■□□□ 1.8
PRKCSH-219ENST00000593101 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
PRKCSH-219ENST00000593101 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
PRKCSH-219ENST00000593101 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
PRKCSH-219ENST00000593101 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
PRKCSH-219ENST00000593101 WDR62O43379 1518 aa26.29■■□□□ 1.8
PRKCSH-219ENST00000593101 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
PRKCSH-219ENST00000593101 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
PRKCSH-219ENST00000593101 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
PRKCSH-219ENST00000593101 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
PRKCSH-219ENST00000593101 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
PRKCSH-219ENST00000593101 CUX2O14529 1486 aa26.11■■□□□ 1.77
PRKCSH-219ENST00000593101 SOGA1O94964 1423 aa26.1■■□□□ 1.77
PRKCSH-219ENST00000593101 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
PRKCSH-219ENST00000593101 IFT140Q96RY7 1462 aa26.02■■□□□ 1.76
PRKCSH-219ENST00000593101 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
PRKCSH-219ENST00000593101 ABCA10Q8WWZ4 1543 aa25.91■■□□□ 1.74
PRKCSH-219ENST00000593101 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
PRKCSH-219ENST00000593101 ZNF608Q9ULD9 1512 aaPredicted RBP25.85■■□□□ 1.73
PRKCSH-219ENST00000593101 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
PRKCSH-219ENST00000593101 KIF27Q86VH2 1401 aa25.82■■□□□ 1.72
PRKCSH-219ENST00000593101 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.729e-8■■■■■ 30.5
PRKCSH-219ENST00000593101 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
PRKCSH-219ENST00000593101 RUSC2Q8N2Y8 1516 aa25.76■■□□□ 1.71
PRKCSH-219ENST00000593101 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
PRKCSH-219ENST00000593101 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
PRKCSH-219ENST00000593101 ABCA5Q8WWZ7 1642 aa25.72■■□□□ 1.71
PRKCSH-219ENST00000593101 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
PRKCSH-219ENST00000593101 EEA1Q15075 1411 aa25.68■■□□□ 1.7
PRKCSH-219ENST00000593101 CSRNP3Q8WYN3 585 aa25.66■■□□□ 1.7
PRKCSH-219ENST00000593101 IGF1RP08069 1367 aa25.66■■□□□ 1.7
PRKCSH-219ENST00000593101 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
PRKCSH-219ENST00000593101 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
PRKCSH-219ENST00000593101 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
PRKCSH-219ENST00000593101 CARMIL1Q5VZK9 1371 aa25.53■■□□□ 1.68
PRKCSH-219ENST00000593101 MAGI1Q96QZ7 1491 aaPredicted RBP25.53■■□□□ 1.68
PRKCSH-219ENST00000593101 FBLN2P98095 1184 aa25.5■■□□□ 1.67
PRKCSH-219ENST00000593101 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
PRKCSH-219ENST00000593101 CHMP7Q8WUX9 453 aaPredicted RBP25.49■■□□□ 1.67
PRKCSH-219ENST00000593101 CUL7Q14999 1698 aa25.48■■□□□ 1.67
PRKCSH-219ENST00000593101 SYNJ2O15056 1496 aa25.44■■□□□ 1.66
PRKCSH-219ENST00000593101 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
PRKCSH-219ENST00000593101 PRXQ9BXM0 1461 aa25.42■■□□□ 1.66
PRKCSH-219ENST00000593101 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
PRKCSH-219ENST00000593101 RAPGEF2Q9Y4G8 1499 aa25.4■■□□□ 1.66
PRKCSH-219ENST00000593101 KIF21BO75037 1637 aa25.33■■□□□ 1.65
PRKCSH-219ENST00000593101 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
PRKCSH-219ENST00000593101 CHD1O14646 1710 aa25.32■■□□□ 1.64
PRKCSH-219ENST00000593101 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
PRKCSH-219ENST00000593101 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
PRKCSH-219ENST00000593101 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
PRKCSH-219ENST00000593101 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
PRKCSH-219ENST00000593101 NUP160Q12769 1436 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms