RNA–Protein interactions for RNA: ENST00000599909.1

RPS5-208, Transcript of ribosomal protein S5, humanhuman

TSL 2

Gene RPS5, Length 523 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS5-208ENST00000599909 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
RPS5-208ENST00000599909 ABCC9O60706 1549 aa25.59■■□□□ 1.69
RPS5-208ENST00000599909 CCDC180Q9P1Z9 1646 aa25.51■■□□□ 1.67
RPS5-208ENST00000599909 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
RPS5-208ENST00000599909 NACADO15069 1562 aa24.11■■□□□ 1.45
RPS5-208ENST00000599909 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
RPS5-208ENST00000599909 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
RPS5-208ENST00000599909 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
RPS5-208ENST00000599909 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
RPS5-208ENST00000599909 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
RPS5-208ENST00000599909 BICRAQ9NZM4 1560 aa23.64■■□□□ 1.37
RPS5-208ENST00000599909 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
RPS5-208ENST00000599909 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
RPS5-208ENST00000599909 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
RPS5-208ENST00000599909 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
RPS5-208ENST00000599909 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
RPS5-208ENST00000599909 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
RPS5-208ENST00000599909 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
RPS5-208ENST00000599909 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
RPS5-208ENST00000599909 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
RPS5-208ENST00000599909 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
RPS5-208ENST00000599909 DNAJC5Q9H3Z4 198 aa22.12■■□□□ 1.13
RPS5-208ENST00000599909 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
RPS5-208ENST00000599909 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
RPS5-208ENST00000599909 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
RPS5-208ENST00000599909 CUX2O14529 1486 aa22.06■■□□□ 1.12
RPS5-208ENST00000599909 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
RPS5-208ENST00000599909 NESP48681 1621 aa21.98■■□□□ 1.11
RPS5-208ENST00000599909 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
RPS5-208ENST00000599909 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
RPS5-208ENST00000599909 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
RPS5-208ENST00000599909 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
RPS5-208ENST00000599909 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
RPS5-208ENST00000599909 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
RPS5-208ENST00000599909 WIZO95785 1651 aa21.63■■□□□ 1.05
RPS5-208ENST00000599909 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
RPS5-208ENST00000599909 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
RPS5-208ENST00000599909 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
RPS5-208ENST00000599909 WDR62O43379 1518 aa21.44■■□□□ 1.02
RPS5-208ENST00000599909 CEP164Q9UPV0 1460 aa21.37■■□□□ 1.01
RPS5-208ENST00000599909 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
RPS5-208ENST00000599909 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
RPS5-208ENST00000599909 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
RPS5-208ENST00000599909 CFTRP13569 1480 aa21.32■■□□□ 1
RPS5-208ENST00000599909 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
RPS5-208ENST00000599909 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
RPS5-208ENST00000599909 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
RPS5-208ENST00000599909 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
RPS5-208ENST00000599909 OSCARQ8IYS5 282 aa21■□□□□ 0.95
RPS5-208ENST00000599909 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
RPS5-208ENST00000599909 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
RPS5-208ENST00000599909 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
RPS5-208ENST00000599909 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
RPS5-208ENST00000599909 EIF4G3O43432 1585 aaKnown RBP20.84■□□□□ 0.93
RPS5-208ENST00000599909 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
RPS5-208ENST00000599909 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
RPS5-208ENST00000599909 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
RPS5-208ENST00000599909 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
RPS5-208ENST00000599909 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
RPS5-208ENST00000599909 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.919e-12■■■■■ 30.4
RPS5-208ENST00000599909 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
RPS5-208ENST00000599909 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
RPS5-208ENST00000599909 CHD1O14646 1710 aa20.71■□□□□ 0.91
RPS5-208ENST00000599909 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
RPS5-208ENST00000599909 SOGA1O94964 1423 aa20.6■□□□□ 0.89
RPS5-208ENST00000599909 FGD5Q6ZNL6 1462 aa20.58■□□□□ 0.89
RPS5-208ENST00000599909 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
RPS5-208ENST00000599909 FBLN2P98095 1184 aa20.57■□□□□ 0.88
RPS5-208ENST00000599909 CUX1P39880 1505 aa20.56■□□□□ 0.88
RPS5-208ENST00000599909 CYB5RLQ6IPT4 315 aa20.53■□□□□ 0.88
RPS5-208ENST00000599909 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
RPS5-208ENST00000599909 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
RPS5-208ENST00000599909 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
RPS5-208ENST00000599909 CLASP1Q7Z460 1538 aa20.46■□□□□ 0.87
RPS5-208ENST00000599909 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
RPS5-208ENST00000599909 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
RPS5-208ENST00000599909 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
RPS5-208ENST00000599909 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
RPS5-208ENST00000599909 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
RPS5-208ENST00000599909 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
RPS5-208ENST00000599909 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
RPS5-208ENST00000599909 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
RPS5-208ENST00000599909 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
RPS5-208ENST00000599909 ABCA10Q8WWZ4 1543 aa20.33■□□□□ 0.85
RPS5-208ENST00000599909 TRHP20396 242 aaPredicted RBP20.33■□□□□ 0.85
RPS5-208ENST00000599909 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
RPS5-208ENST00000599909 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.823e-17■□□□□ 8
RPS5-208ENST00000599909 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
RPS5-208ENST00000599909 ADAMTS12P58397 1594 aa20.19■□□□□ 0.82
RPS5-208ENST00000599909 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
RPS5-208ENST00000599909 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
RPS5-208ENST00000599909 CEP170Q5SW79 1584 aa20.15■□□□□ 0.82
RPS5-208ENST00000599909 NUP160Q12769 1436 aa20.12■□□□□ 0.81
RPS5-208ENST00000599909 FHAD1B1AJZ9 1412 aa20.09■□□□□ 0.81
RPS5-208ENST00000599909 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
RPS5-208ENST00000599909 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
RPS5-208ENST00000599909 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
RPS5-208ENST00000599909 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
RPS5-208ENST00000599909 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
RPS5-208ENST00000599909 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms