RNA–Protein interactions for RNA: ENST00000260356.5

THBS1-201, Transcript of thrombospondin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS1, Length 7,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-201ENST00000260356 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
THBS1-201ENST00000260356 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
THBS1-201ENST00000260356 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
THBS1-201ENST00000260356 APLP2Q06481 763 aa17.83■□□□□ 0.44
THBS1-201ENST00000260356 ERICH6Q7L0X2 663 aa17.76■□□□□ 0.43
THBS1-201ENST00000260356 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
THBS1-201ENST00000260356 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
THBS1-201ENST00000260356 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
THBS1-201ENST00000260356 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.41
THBS1-201ENST00000260356 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
THBS1-201ENST00000260356 MYT1Q01538 1121 aa17.45■□□□□ 0.38
THBS1-201ENST00000260356 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
THBS1-201ENST00000260356 PCGF6Q9BYE7 350 aa17.32■□□□□ 0.36
THBS1-201ENST00000260356 NISCHQ9Y2I1 1504 aa17.3■□□□□ 0.36
THBS1-201ENST00000260356 NEFLP07196 543 aa17.26■□□□□ 0.35
THBS1-201ENST00000260356 TTBK1Q5TCY1 1321 aaPredicted RBP17.23■□□□□ 0.35
THBS1-201ENST00000260356 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.31
THBS1-201ENST00000260356 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
THBS1-201ENST00000260356 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
THBS1-201ENST00000260356 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
THBS1-201ENST00000260356 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
THBS1-201ENST00000260356 UBTFP17480 764 aaKnown RBP16.83■□□□□ 0.28
THBS1-201ENST00000260356 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.23
THBS1-201ENST00000260356 POLR3GLQ9BT43 218 aa16.51■□□□□ 0.23
THBS1-201ENST00000260356 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
THBS1-201ENST00000260356 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
THBS1-201ENST00000260356 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.23
THBS1-201ENST00000260356 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
THBS1-201ENST00000260356 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
THBS1-201ENST00000260356 HRCP23327 699 aa16.37■□□□□ 0.21
THBS1-201ENST00000260356 ITGAEP38570 1179 aa16.34■□□□□ 0.21
THBS1-201ENST00000260356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
THBS1-201ENST00000260356 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
THBS1-201ENST00000260356 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
THBS1-201ENST00000260356 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
THBS1-201ENST00000260356 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
THBS1-201ENST00000260356 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
THBS1-201ENST00000260356 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
THBS1-201ENST00000260356 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
THBS1-201ENST00000260356 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
THBS1-201ENST00000260356 ANP32CO43423 234 aa15.91■□□□□ 0.14
THBS1-201ENST00000260356 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
THBS1-201ENST00000260356 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
THBS1-201ENST00000260356 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
THBS1-201ENST00000260356 BCANQ96GW7 911 aa15.84■□□□□ 0.13
THBS1-201ENST00000260356 ANP32AP39687 249 aaKnown RBP15.84■□□□□ 0.13
THBS1-201ENST00000260356 ANP32BQ92688 251 aaKnown RBP15.84■□□□□ 0.13
THBS1-201ENST00000260356 NEFMP07197 916 aa15.83■□□□□ 0.12
THBS1-201ENST00000260356 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
THBS1-201ENST00000260356 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
THBS1-201ENST00000260356 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
THBS1-201ENST00000260356 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
THBS1-201ENST00000260356 GLIPR1L2Q4G1C9 344 aa15.74■□□□□ 0.11
THBS1-201ENST00000260356 EIF5BO60841 1220 aaKnown RBP15.71■□□□□ 0.11
THBS1-201ENST00000260356 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
THBS1-201ENST00000260356 HSP90AA1P07900 732 aaKnown RBP15.69■□□□□ 0.1
THBS1-201ENST00000260356 UPF2Q9HAU5 1272 aaKnown RBP15.63■□□□□ 0.09
THBS1-201ENST00000260356 NPM2Q86SE8 214 aaKnown RBP15.6■□□□□ 0.09
THBS1-201ENST00000260356 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
THBS1-201ENST00000260356 FKBP8Q14318 412 aa15.39■□□□□ 0.05
THBS1-201ENST00000260356 CDK11BP21127 795 aaKnown RBP15.39■□□□□ 0.05
THBS1-201ENST00000260356 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
THBS1-201ENST00000260356 FBLN2P98095 1184 aa15.36■□□□□ 0.05
THBS1-201ENST00000260356 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
THBS1-201ENST00000260356 NBR1Q14596 966 aa15.32■□□□□ 0.04
THBS1-201ENST00000260356 ESF1Q9H501 851 aaKnown RBP15.32■□□□□ 0.04
THBS1-201ENST00000260356 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
THBS1-201ENST00000260356 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
THBS1-201ENST00000260356 ARXQ96QS3 562 aa15.27■□□□□ 0.04
THBS1-201ENST00000260356 TMC1Q8TDI8 760 aa15.26■□□□□ 0.03
THBS1-201ENST00000260356 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
THBS1-201ENST00000260356 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
THBS1-201ENST00000260356 FAM9BQ8IZU0 186 aa15.25■□□□□ 0.03
THBS1-201ENST00000260356 TRIM44Q96DX7 344 aaPredicted RBP15.24■□□□□ 0.03
THBS1-201ENST00000260356 ANP32EQ9BTT0 268 aa15.24■□□□□ 0.03
THBS1-201ENST00000260356 ZNF777Q9ULD5 760 aaPredicted RBP15.23■□□□□ 0.03
THBS1-201ENST00000260356 MYH16Q9H6N6 1097 aa15.23■□□□□ 0.03
THBS1-201ENST00000260356 SALL2Q9Y467 1007 aaPredicted RBP15.2■□□□□ 0.02
THBS1-201ENST00000260356 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
THBS1-201ENST00000260356 BECN1Q14457 450 aa15.19■□□□□ 0.02
THBS1-201ENST00000260356 NCLP19338 710 aaKnown RBP15.19■□□□□ 0.02
THBS1-201ENST00000260356 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
THBS1-201ENST00000260356 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
THBS1-201ENST00000260356 DDX10Q13206 875 aaKnown RBP15.16■□□□□ 0.02
THBS1-201ENST00000260356 GOLGA6L22H0YM25 854 aa15.15■□□□□ 0.02
THBS1-201ENST00000260356 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
THBS1-201ENST00000260356 ARID3CA6NKF2 412 aa15.14■□□□□ 0.01
THBS1-201ENST00000260356 ZRSR1Q15695 479 aaKnown RBP15.1■□□□□ 0.01
THBS1-201ENST00000260356 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
THBS1-201ENST00000260356 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
THBS1-201ENST00000260356 MRS2Q9HD23 443 aa15.05■□□□□ -0
THBS1-201ENST00000260356 DNTTIP2Q5QJE6 756 aaKnown RBP15.05■□□□□ -0
THBS1-201ENST00000260356 PTMAP06454 111 aaKnown RBP15.04■□□□□ -0
THBS1-201ENST00000260356 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
THBS1-201ENST00000260356 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
THBS1-201ENST00000260356 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
THBS1-201ENST00000260356 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
THBS1-201ENST00000260356 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
THBS1-201ENST00000260356 ABCC9O60706 1549 aa14.98□□□□□ -0.01
THBS1-201ENST00000260356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.017e-7■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms