RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-219ENST00000502751 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
LMNA-219ENST00000502751 CCDC180Q9P1Z9 1646 aa36.13■■■■□ 3.37
LMNA-219ENST00000502751 ABCC9O60706 1549 aa35.97■■■■□ 3.35
LMNA-219ENST00000502751 RB1CC1Q8TDY2 1594 aa34.3■■■■□ 3.08
LMNA-219ENST00000502751 DCAF8L2P0C7V8 631 aa34.25■■■■□ 3.07
LMNA-219ENST00000502751 NACADO15069 1562 aa34.17■■■■□ 3.06
LMNA-219ENST00000502751 MYO15BQ96JP2 1530 aa33.82■■■■□ 3
LMNA-219ENST00000502751 ZCCHC6Q5VYS8 1495 aaKnown RBP33.66■■■□□ 2.98
LMNA-219ENST00000502751 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
LMNA-219ENST00000502751 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
LMNA-219ENST00000502751 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
LMNA-219ENST00000502751 UNC13AQ9UPW8 1703 aa33.47■■■□□ 2.95
LMNA-219ENST00000502751 BICRAQ9NZM4 1560 aa33.33■■■□□ 2.93
LMNA-219ENST00000502751 SCRIBQ14160 1630 aa33.01■■■□□ 2.87
LMNA-219ENST00000502751 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
LMNA-219ENST00000502751 EIF4G1Q04637 1599 aaKnown RBP32.47■■■□□ 2.79
LMNA-219ENST00000502751 CC2D2AQ9P2K1 1620 aa32.46■■■□□ 2.79
LMNA-219ENST00000502751 CECR2Q9BXF3 1484 aa32.36■■■□□ 2.77
LMNA-219ENST00000502751 NCAPD3P42695 1498 aa31.62■■■□□ 2.65
LMNA-219ENST00000502751 ATAD2BQ9ULI0 1458 aa31.55■■■□□ 2.64
LMNA-219ENST00000502751 SMARCA4P51532 1647 aa31.52■■■□□ 2.64
LMNA-219ENST00000502751 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
LMNA-219ENST00000502751 SMARCA2P51531 1590 aa31.41■■■□□ 2.62
LMNA-219ENST00000502751 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
LMNA-219ENST00000502751 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
LMNA-219ENST00000502751 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
LMNA-219ENST00000502751 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
LMNA-219ENST00000502751 NESP48681 1621 aa31■■■□□ 2.55
LMNA-219ENST00000502751 ERCC6Q03468 1493 aa31■■■□□ 2.55
LMNA-219ENST00000502751 WIZO95785 1651 aa30.88■■■□□ 2.53
LMNA-219ENST00000502751 CUX2O14529 1486 aa30.82■■■□□ 2.52
LMNA-219ENST00000502751 RSF1Q96T23 1441 aaPredicted RBP30.8■■■□□ 2.52
LMNA-219ENST00000502751 LAMC3Q9Y6N6 1575 aa30.75■■■□□ 2.51
LMNA-219ENST00000502751 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
LMNA-219ENST00000502751 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
LMNA-219ENST00000502751 DNAJC5Q9H3Z4 198 aa30.58■■■□□ 2.49
LMNA-219ENST00000502751 THOC2Q8NI27 1593 aaKnown RBP30.51■■■□□ 2.47
LMNA-219ENST00000502751 TOP2AP11388 1531 aaKnown RBP30.5■■■□□ 2.47
LMNA-219ENST00000502751 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
LMNA-219ENST00000502751 CFTRP13569 1480 aa30.38■■■□□ 2.45
LMNA-219ENST00000502751 MRC2Q9UBG0 1479 aa30.32■■■□□ 2.44
LMNA-219ENST00000502751 FANCD2Q9BXW9 1451 aa30.29■■■□□ 2.44
LMNA-219ENST00000502751 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
LMNA-219ENST00000502751 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
LMNA-219ENST00000502751 WDR62O43379 1518 aa30.22■■■□□ 2.43
LMNA-219ENST00000502751 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.4
LMNA-219ENST00000502751 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
LMNA-219ENST00000502751 SUPT5HO00267 1087 aaKnown RBP29.75■■■□□ 2.35
LMNA-219ENST00000502751 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
LMNA-219ENST00000502751 ABCC8Q09428 1581 aa29.7■■■□□ 2.35
LMNA-219ENST00000502751 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
LMNA-219ENST00000502751 ZNF608Q9ULD9 1512 aaPredicted RBP29.62■■■□□ 2.33
LMNA-219ENST00000502751 DNMBPQ6XZF7 1577 aa29.62■■■□□ 2.33
LMNA-219ENST00000502751 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
LMNA-219ENST00000502751 POLA1P09884 1462 aaPredicted RBP29.47■■■□□ 2.31
LMNA-219ENST00000502751 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.32e-11■■■■■ 40.9
LMNA-219ENST00000502751 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
LMNA-219ENST00000502751 RAD54L2Q9Y4B4 1467 aa29.4■■■□□ 2.3
LMNA-219ENST00000502751 SOGA1O94964 1423 aa29.39■■■□□ 2.3
LMNA-219ENST00000502751 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
LMNA-219ENST00000502751 CUX1P39880 1505 aa29.35■■■□□ 2.29
LMNA-219ENST00000502751 TRIM41Q8WV44 630 aa29.34■■■□□ 2.29
LMNA-219ENST00000502751 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
LMNA-219ENST00000502751 TDRD9Q8NDG6 1382 aaKnown RBP29.32■■■□□ 2.28
LMNA-219ENST00000502751 FBLN2P98095 1184 aa29.2■■■□□ 2.26
LMNA-219ENST00000502751 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
LMNA-219ENST00000502751 CHD1O14646 1710 aa29.06■■■□□ 2.24
LMNA-219ENST00000502751 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
LMNA-219ENST00000502751 GRIN2BQ13224 1484 aa29.04■■■□□ 2.24
LMNA-219ENST00000502751 CHMP7Q8WUX9 453 aaPredicted RBP29.04■■■□□ 2.24
LMNA-219ENST00000502751 RIMBP3CA6NJZ7 1639 aa29.03■■■□□ 2.24
LMNA-219ENST00000502751 RIMBP3BA6NNM3 1639 aa29.03■■■□□ 2.24
LMNA-219ENST00000502751 RIMBP3Q9UFD9 1639 aa29.03■■■□□ 2.24
LMNA-219ENST00000502751 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.23
LMNA-219ENST00000502751 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.235e-6■■■■■ 29.2
LMNA-219ENST00000502751 ARHGEF11O15085 1522 aa29■■■□□ 2.23
LMNA-219ENST00000502751 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
LMNA-219ENST00000502751 MAGI1Q96QZ7 1491 aaPredicted RBP28.98■■■□□ 2.23
LMNA-219ENST00000502751 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
LMNA-219ENST00000502751 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
LMNA-219ENST00000502751 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
LMNA-219ENST00000502751 CYB5RLQ6IPT4 315 aa28.9■■■□□ 2.22
LMNA-219ENST00000502751 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
LMNA-219ENST00000502751 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
LMNA-219ENST00000502751 PBRM1Q86U86 1689 aa28.83■■■□□ 2.21
LMNA-219ENST00000502751 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
LMNA-219ENST00000502751 ARAP1Q96P48 1450 aa28.75■■■□□ 2.19
LMNA-219ENST00000502751 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
LMNA-219ENST00000502751 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
LMNA-219ENST00000502751 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
LMNA-219ENST00000502751 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
LMNA-219ENST00000502751 NUP160Q12769 1436 aa28.58■■■□□ 2.17
LMNA-219ENST00000502751 CEP170Q5SW79 1584 aa28.53■■■□□ 2.16
LMNA-219ENST00000502751 IGF1RP08069 1367 aa28.47■■■□□ 2.15
LMNA-219ENST00000502751 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
LMNA-219ENST00000502751 TRHP20396 242 aaPredicted RBP28.44■■■□□ 2.14
LMNA-219ENST00000502751 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
LMNA-219ENST00000502751 JPH4Q96JJ6 628 aa28.39■■■□□ 2.14
LMNA-219ENST00000502751 SHROOM2Q13796 1616 aa28.35■■■□□ 2.13
LMNA-219ENST00000502751 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms