RNA–Protein interactions for RNA: ENST00000531983.1

RBBP4-219, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-219ENST00000531983 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
RBBP4-219ENST00000531983 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
RBBP4-219ENST00000531983 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
RBBP4-219ENST00000531983 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
RBBP4-219ENST00000531983 FOXD1Q16676 465 aa15.83■□□□□ 0.12
RBBP4-219ENST00000531983 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
RBBP4-219ENST00000531983 MSH5O43196 834 aa14.96□□□□□ -0.01
RBBP4-219ENST00000531983 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
RBBP4-219ENST00000531983 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
RBBP4-219ENST00000531983 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
RBBP4-219ENST00000531983 ADRA2BP18089 450 aa14.5□□□□□ -0.09
RBBP4-219ENST00000531983 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
RBBP4-219ENST00000531983 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
RBBP4-219ENST00000531983 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
RBBP4-219ENST00000531983 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
RBBP4-219ENST00000531983 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
RBBP4-219ENST00000531983 ABCC9O60706 1549 aa12.95□□□□□ -0.34
RBBP4-219ENST00000531983 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
RBBP4-219ENST00000531983 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
RBBP4-219ENST00000531983 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
RBBP4-219ENST00000531983 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
RBBP4-219ENST00000531983 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
RBBP4-219ENST00000531983 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
RBBP4-219ENST00000531983 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
RBBP4-219ENST00000531983 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
RBBP4-219ENST00000531983 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
RBBP4-219ENST00000531983 RB1CC1Q8TDY2 1594 aa12.32□□□□□ -0.44
RBBP4-219ENST00000531983 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
RBBP4-219ENST00000531983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.466e-7■□□□□ 10.7
RBBP4-219ENST00000531983 NACADO15069 1562 aa12.18□□□□□ -0.46
RBBP4-219ENST00000531983 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
RBBP4-219ENST00000531983 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
RBBP4-219ENST00000531983 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.49
RBBP4-219ENST00000531983 MYO15BQ96JP2 1530 aa11.95□□□□□ -0.5
RBBP4-219ENST00000531983 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
RBBP4-219ENST00000531983 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
RBBP4-219ENST00000531983 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
RBBP4-219ENST00000531983 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
RBBP4-219ENST00000531983 CAPN15O75808 1086 aa11.81□□□□□ -0.52
RBBP4-219ENST00000531983 DSG3P32926 999 aa11.81□□□□□ -0.52
RBBP4-219ENST00000531983 SPINK5Q9NQ38 1064 aaPredicted RBP11.8□□□□□ -0.52
RBBP4-219ENST00000531983 ZCCHC6Q5VYS8 1495 aaKnown RBP11.78□□□□□ -0.52
RBBP4-219ENST00000531983 POTEHQ6S545 545 aa11.77□□□□□ -0.53
RBBP4-219ENST00000531983 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
RBBP4-219ENST00000531983 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
RBBP4-219ENST00000531983 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.54
RBBP4-219ENST00000531983 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
RBBP4-219ENST00000531983 EIF4G1Q04637 1599 aaKnown RBP11.67□□□□□ -0.54
RBBP4-219ENST00000531983 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
RBBP4-219ENST00000531983 KCNA4P22459 653 aa11.56□□□□□ -0.56
RBBP4-219ENST00000531983 APLP2Q06481 763 aa11.56□□□□□ -0.56
RBBP4-219ENST00000531983 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
RBBP4-219ENST00000531983 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
RBBP4-219ENST00000531983 ABCB7O75027 752 aa11.5□□□□□ -0.57
RBBP4-219ENST00000531983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
RBBP4-219ENST00000531983 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
RBBP4-219ENST00000531983 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
RBBP4-219ENST00000531983 RBM42Q9BTD8 480 aaKnown RBP11.3□□□□□ -0.6
RBBP4-219ENST00000531983 CUX2O14529 1486 aa11.26□□□□□ -0.61
RBBP4-219ENST00000531983 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
RBBP4-219ENST00000531983 ERCC6Q03468 1493 aa11.25□□□□□ -0.61
RBBP4-219ENST00000531983 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
RBBP4-219ENST00000531983 SMARCA2P51531 1590 aa11.18□□□□□ -0.62
RBBP4-219ENST00000531983 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
RBBP4-219ENST00000531983 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
RBBP4-219ENST00000531983 POLA2Q14181 598 aa11.16□□□□□ -0.62
RBBP4-219ENST00000531983 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
RBBP4-219ENST00000531983 SMARCA4P51532 1647 aa11.16□□□□□ -0.62
RBBP4-219ENST00000531983 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
RBBP4-219ENST00000531983 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
RBBP4-219ENST00000531983 BAZ1BQ9UIG0 1483 aaKnown RBP11.09□□□□□ -0.63
RBBP4-219ENST00000531983 THOC2Q8NI27 1593 aaKnown RBP11.06□□□□□ -0.64
RBBP4-219ENST00000531983 NESP48681 1621 aa11.06□□□□□ -0.64
RBBP4-219ENST00000531983 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
RBBP4-219ENST00000531983 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
RBBP4-219ENST00000531983 KIF21AQ7Z4S6 1674 aa10.98□□□□□ -0.65
RBBP4-219ENST00000531983 AKT1S1Q96B36 256 aa10.96□□□□□ -0.65
RBBP4-219ENST00000531983 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
RBBP4-219ENST00000531983 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
RBBP4-219ENST00000531983 MROH2BQ7Z745 1585 aa10.92□□□□□ -0.66
RBBP4-219ENST00000531983 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
RBBP4-219ENST00000531983 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
RBBP4-219ENST00000531983 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
RBBP4-219ENST00000531983 MRC2Q9UBG0 1479 aa10.88□□□□□ -0.67
RBBP4-219ENST00000531983 WDR62O43379 1518 aa10.87□□□□□ -0.67
RBBP4-219ENST00000531983 SLC4A1APQ9BWU0 796 aaKnown RBP10.86□□□□□ -0.67
RBBP4-219ENST00000531983 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
RBBP4-219ENST00000531983 OSCARQ8IYS5 282 aa10.83□□□□□ -0.68
RBBP4-219ENST00000531983 CEP164Q9UPV0 1460 aa10.82□□□□□ -0.68
RBBP4-219ENST00000531983 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
RBBP4-219ENST00000531983 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
RBBP4-219ENST00000531983 WIZO95785 1651 aa10.8□□□□□ -0.68
RBBP4-219ENST00000531983 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
RBBP4-219ENST00000531983 FANCD2Q9BXW9 1451 aa10.75□□□□□ -0.69
RBBP4-219ENST00000531983 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
RBBP4-219ENST00000531983 TOP2AP11388 1531 aaKnown RBP10.71□□□□□ -0.69
RBBP4-219ENST00000531983 CFTRP13569 1480 aa10.7□□□□□ -0.7
RBBP4-219ENST00000531983 HAX1O00165 279 aa10.7□□□□□ -0.7
RBBP4-219ENST00000531983 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
RBBP4-219ENST00000531983 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms