Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.42■■□□□ 1.82
PCDHB2Q9Y5E7 AL451085.2-201ENST00000605085 799 ntBASIC26.42■■□□□ 1.82
PCDHB2Q9Y5E7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.42■■□□□ 1.82
PCDHB2Q9Y5E7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB2Q9Y5E7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
PCDHB2Q9Y5E7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.41■■□□□ 1.82
PCDHB2Q9Y5E7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB2Q9Y5E7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB2Q9Y5E7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB2Q9Y5E7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
PCDHB2Q9Y5E7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHB2Q9Y5E7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHB2Q9Y5E7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDHB2Q9Y5E7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHB2Q9Y5E7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHB2Q9Y5E7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDHB2Q9Y5E7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
PCDHB2Q9Y5E7 AC087393.1-201ENST00000582896 145 ntBASIC26.4■■□□□ 1.82
PCDHB2Q9Y5E7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 YBX1P4-201ENST00000392794 808 ntBASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB2Q9Y5E7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHB2Q9Y5E7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHB2Q9Y5E7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHB2Q9Y5E7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHB2Q9Y5E7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.38■■□□□ 1.81
PCDHB2Q9Y5E7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.37■■□□□ 1.81
PCDHB2Q9Y5E7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB2Q9Y5E7 RPS2P7-201ENST00000447334 885 ntBASIC26.37■■□□□ 1.81
PCDHB2Q9Y5E7 AL035685.1-201ENST00000636663 812 ntBASIC26.37■■□□□ 1.81
PCDHB2Q9Y5E7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB2Q9Y5E7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB2Q9Y5E7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB2Q9Y5E7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 MIR4508-201ENST00000584178 70 ntBASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.36■■□□□ 1.81
PCDHB2Q9Y5E7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB2Q9Y5E7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB2Q9Y5E7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.35■■□□□ 1.81
PCDHB2Q9Y5E7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB2Q9Y5E7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
PCDHB2Q9Y5E7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB2Q9Y5E7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB2Q9Y5E7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB2Q9Y5E7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
PCDHB2Q9Y5E7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB2Q9Y5E7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB2Q9Y5E7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHB2Q9Y5E7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB2Q9Y5E7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB2Q9Y5E7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB2Q9Y5E7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB2Q9Y5E7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB2Q9Y5E7 AC019171.1-201ENST00000601251 1056 ntBASIC26.32■■□□□ 1.8
PCDHB2Q9Y5E7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB2Q9Y5E7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHB2Q9Y5E7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.31■■□□□ 1.8
PCDHB2Q9Y5E7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHB2Q9Y5E7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHB2Q9Y5E7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHB2Q9Y5E7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB2Q9Y5E7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHB2Q9Y5E7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHB2Q9Y5E7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB2Q9Y5E7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB2Q9Y5E7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB2Q9Y5E7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB2Q9Y5E7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHB2Q9Y5E7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB2Q9Y5E7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHB2Q9Y5E7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB2Q9Y5E7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHB2Q9Y5E7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB2Q9Y5E7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB2Q9Y5E7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PCDHB2Q9Y5E7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDHB2Q9Y5E7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB2Q9Y5E7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDHB2Q9Y5E7 LONRF2P2-201ENST00000439212 571 ntBASIC26.28■■□□□ 1.8
PCDHB2Q9Y5E7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB2Q9Y5E7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB2Q9Y5E7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHB2Q9Y5E7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB2Q9Y5E7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.27■■□□□ 1.8
PCDHB2Q9Y5E7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCDHB2Q9Y5E7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHB2Q9Y5E7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHB2Q9Y5E7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB2Q9Y5E7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms