Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ATXN3LQ9H3M9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 AL031848.2-201ENST00000607670 837 ntBASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ATXN3LQ9H3M9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 AC142472.1-201ENST00000612013 1741 ntBASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATXN3LQ9H3M9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATXN3LQ9H3M9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATXN3LQ9H3M9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ATXN3LQ9H3M9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ATXN3LQ9H3M9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATXN3LQ9H3M9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATXN3LQ9H3M9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 LONRF2P2-201ENST00000439212 571 ntBASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
ATXN3LQ9H3M9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.28■■□□□ 1.64
ATXN3LQ9H3M9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.28■■□□□ 1.64
ATXN3LQ9H3M9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATXN3LQ9H3M9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
ATXN3LQ9H3M9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATXN3LQ9H3M9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
ATXN3LQ9H3M9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.28■■□□□ 1.64
ATXN3LQ9H3M9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATXN3LQ9H3M9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.27■■□□□ 1.64
ATXN3LQ9H3M9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.27■■□□□ 1.64
ATXN3LQ9H3M9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATXN3LQ9H3M9 AP004609.3-201ENST00000610705 1884 ntBASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 KRT18P10-201ENST00000388836 1287 ntBASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ATXN3LQ9H3M9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATXN3LQ9H3M9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATXN3LQ9H3M9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ATXN3LQ9H3M9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ATXN3LQ9H3M9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATXN3LQ9H3M9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.25■■□□□ 1.63
ATXN3LQ9H3M9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATXN3LQ9H3M9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
ATXN3LQ9H3M9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ATXN3LQ9H3M9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.24■■□□□ 1.63
ATXN3LQ9H3M9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATXN3LQ9H3M9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ATXN3LQ9H3M9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.23■■□□□ 1.63
ATXN3LQ9H3M9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ATXN3LQ9H3M9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
ATXN3LQ9H3M9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATXN3LQ9H3M9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.22■■□□□ 1.63
ATXN3LQ9H3M9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ATXN3LQ9H3M9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATXN3LQ9H3M9 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.22■■□□□ 1.63
ATXN3LQ9H3M9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.22■■□□□ 1.63
ATXN3LQ9H3M9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.22■■□□□ 1.63
ATXN3LQ9H3M9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.21■■□□□ 1.63
ATXN3LQ9H3M9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ATXN3LQ9H3M9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.21■■□□□ 1.63
ATXN3LQ9H3M9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATXN3LQ9H3M9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATXN3LQ9H3M9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.2■■□□□ 1.62
ATXN3LQ9H3M9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.2■■□□□ 1.62
ATXN3LQ9H3M9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ATXN3LQ9H3M9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
ATXN3LQ9H3M9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ATXN3LQ9H3M9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.19■■□□□ 1.62
ATXN3LQ9H3M9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
ATXN3LQ9H3M9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.19■■□□□ 1.62
ATXN3LQ9H3M9 GUSBP5-201ENST00000418136 578 ntBASIC25.19■■□□□ 1.62
ATXN3LQ9H3M9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
ATXN3LQ9H3M9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ATXN3LQ9H3M9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATXN3LQ9H3M9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ATXN3LQ9H3M9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
ATXN3LQ9H3M9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.18■■□□□ 1.62
ATXN3LQ9H3M9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms