Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC091060.1-201ENST00000623524 1766 ntBASIC25.25■■□□□ 1.63
RNF139Q8WU17 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RNF139Q8WU17 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF139Q8WU17 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF139Q8WU17 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF139Q8WU17 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.23■■□□□ 1.63
RNF139Q8WU17 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RNF139Q8WU17 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.23■■□□□ 1.63
RNF139Q8WU17 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF139Q8WU17 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF139Q8WU17 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.22■■□□□ 1.63
RNF139Q8WU17 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.22■■□□□ 1.63
RNF139Q8WU17 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.22■■□□□ 1.63
RNF139Q8WU17 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF139Q8WU17 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
RNF139Q8WU17 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RNF139Q8WU17 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RNF139Q8WU17 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RNF139Q8WU17 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF139Q8WU17 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF139Q8WU17 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.21■■□□□ 1.63
RNF139Q8WU17 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RNF139Q8WU17 AC092803.2-201ENST00000564287 1899 ntBASIC25.21■■□□□ 1.63
RNF139Q8WU17 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RNF139Q8WU17 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
RNF139Q8WU17 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF139Q8WU17 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RNF139Q8WU17 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.2■■□□□ 1.62
RNF139Q8WU17 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RNF139Q8WU17 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
RNF139Q8WU17 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF139Q8WU17 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
RNF139Q8WU17 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF139Q8WU17 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.18■■□□□ 1.62
RNF139Q8WU17 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
RNF139Q8WU17 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF139Q8WU17 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
RNF139Q8WU17 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.18■■□□□ 1.62
RNF139Q8WU17 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.18■■□□□ 1.62
RNF139Q8WU17 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
RNF139Q8WU17 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF139Q8WU17 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF139Q8WU17 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF139Q8WU17 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF139Q8WU17 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RNF139Q8WU17 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
RNF139Q8WU17 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.17■■□□□ 1.62
RNF139Q8WU17 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.16■■□□□ 1.62
RNF139Q8WU17 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.16■■□□□ 1.62
RNF139Q8WU17 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF139Q8WU17 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF139Q8WU17 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.16■■□□□ 1.62
RNF139Q8WU17 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF139Q8WU17 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.16■■□□□ 1.62
RNF139Q8WU17 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.16■■□□□ 1.62
RNF139Q8WU17 BHLHE23-202ENST00000612929 1109 ntBASIC25.16■■□□□ 1.62
RNF139Q8WU17 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF139Q8WU17 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF139Q8WU17 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.16■■□□□ 1.62
RNF139Q8WU17 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF139Q8WU17 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF139Q8WU17 AC145676.1-201ENST00000514988 2004 ntBASIC25.15■■□□□ 1.62
RNF139Q8WU17 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.15■■□□□ 1.62
RNF139Q8WU17 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF139Q8WU17 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.14■■□□□ 1.62
RNF139Q8WU17 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF139Q8WU17 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
RNF139Q8WU17 KRT18P10-201ENST00000388836 1287 ntBASIC25.14■■□□□ 1.62
RNF139Q8WU17 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RNF139Q8WU17 AC139795.1-202ENST00000500444 432 ntBASIC25.14■■□□□ 1.62
RNF139Q8WU17 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.14■■□□□ 1.62
RNF139Q8WU17 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.14■■□□□ 1.62
RNF139Q8WU17 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.14■■□□□ 1.62
RNF139Q8WU17 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF139Q8WU17 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RNF139Q8WU17 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF139Q8WU17 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.13■■□□□ 1.61
RNF139Q8WU17 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF139Q8WU17 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RNF139Q8WU17 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RNF139Q8WU17 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF139Q8WU17 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF139Q8WU17 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RNF139Q8WU17 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF139Q8WU17 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF139Q8WU17 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF139Q8WU17 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF139Q8WU17 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF139Q8WU17 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF139Q8WU17 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
RNF139Q8WU17 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF139Q8WU17 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF139Q8WU17 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF139Q8WU17 DUSP8P4-201ENST00000399538 1761 ntBASIC25.1■■□□□ 1.61
RNF139Q8WU17 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF139Q8WU17 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF139Q8WU17 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF139Q8WU17 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.09■■□□□ 1.61
RNF139Q8WU17 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF139Q8WU17 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms