Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 KRT18P10-201ENST00000388836 1287 ntBASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNEP1R1Q8N9A8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNEP1R1Q8N9A8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNEP1R1Q8N9A8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.35■■□□□ 1.01
CNEP1R1Q8N9A8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNEP1R1Q8N9A8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.35■■□□□ 1.01
CNEP1R1Q8N9A8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNEP1R1Q8N9A8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNEP1R1Q8N9A8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNEP1R1Q8N9A8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.34■■□□□ 1.01
CNEP1R1Q8N9A8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNEP1R1Q8N9A8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNEP1R1Q8N9A8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 AC103834.1-201ENST00000520383 144 ntBASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNEP1R1Q8N9A8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.33■■□□□ 1
CNEP1R1Q8N9A8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.33■■□□□ 1
CNEP1R1Q8N9A8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.33■■□□□ 1
CNEP1R1Q8N9A8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 AL451085.2-201ENST00000605085 799 ntBASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNEP1R1Q8N9A8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNEP1R1Q8N9A8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CNEP1R1Q8N9A8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.31■■□□□ 1
CNEP1R1Q8N9A8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CNEP1R1Q8N9A8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CNEP1R1Q8N9A8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.31■■□□□ 1
CNEP1R1Q8N9A8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNEP1R1Q8N9A8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.3■■□□□ 1
CNEP1R1Q8N9A8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CNEP1R1Q8N9A8 MIR4508-201ENST00000584178 70 ntBASIC21.3■■□□□ 1
CNEP1R1Q8N9A8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CNEP1R1Q8N9A8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CNEP1R1Q8N9A8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CNEP1R1Q8N9A8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.29■■□□□ 1
CNEP1R1Q8N9A8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.29■■□□□ 1
CNEP1R1Q8N9A8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.29■■□□□ 1
CNEP1R1Q8N9A8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 LONRF2P2-201ENST00000439212 571 ntBASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 AC019171.1-201ENST00000601251 1056 ntBASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 AL035685.1-201ENST00000636663 812 ntBASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNEP1R1Q8N9A8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.27■■□□□ 1
CNEP1R1Q8N9A8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.26■□□□□ 0.99
CNEP1R1Q8N9A8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.26■□□□□ 0.99
CNEP1R1Q8N9A8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.26■□□□□ 0.99
CNEP1R1Q8N9A8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNEP1R1Q8N9A8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNEP1R1Q8N9A8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 AL031848.2-201ENST00000607670 837 ntBASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNEP1R1Q8N9A8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNEP1R1Q8N9A8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNEP1R1Q8N9A8 AC103724.3-201ENST00000564481 992 ntBASIC21.24■□□□□ 0.99
CNEP1R1Q8N9A8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.24■□□□□ 0.99
CNEP1R1Q8N9A8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNEP1R1Q8N9A8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNEP1R1Q8N9A8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNEP1R1Q8N9A8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CNEP1R1Q8N9A8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CNEP1R1Q8N9A8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms