Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
UBE3BQ7Z3V4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.24■■■□□ 2.43
UBE3BQ7Z3V4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
UBE3BQ7Z3V4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
UBE3BQ7Z3V4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.24■■■□□ 2.43
UBE3BQ7Z3V4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.23■■■□□ 2.43
UBE3BQ7Z3V4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
UBE3BQ7Z3V4 MIR4508-201ENST00000584178 70 ntBASIC30.23■■■□□ 2.43
UBE3BQ7Z3V4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
UBE3BQ7Z3V4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
UBE3BQ7Z3V4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
UBE3BQ7Z3V4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.22■■■□□ 2.43
UBE3BQ7Z3V4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
UBE3BQ7Z3V4 LONRF2P2-201ENST00000439212 571 ntBASIC30.22■■■□□ 2.43
UBE3BQ7Z3V4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
UBE3BQ7Z3V4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
UBE3BQ7Z3V4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.21■■■□□ 2.43
UBE3BQ7Z3V4 AC019171.1-201ENST00000601251 1056 ntBASIC30.21■■■□□ 2.43
UBE3BQ7Z3V4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.21■■■□□ 2.43
UBE3BQ7Z3V4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.21■■■□□ 2.43
UBE3BQ7Z3V4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
UBE3BQ7Z3V4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
UBE3BQ7Z3V4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.2■■■□□ 2.43
UBE3BQ7Z3V4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
UBE3BQ7Z3V4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
UBE3BQ7Z3V4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.19■■■□□ 2.42
UBE3BQ7Z3V4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
UBE3BQ7Z3V4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
UBE3BQ7Z3V4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.19■■■□□ 2.42
UBE3BQ7Z3V4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.18■■■□□ 2.42
UBE3BQ7Z3V4 AL035685.1-201ENST00000636663 812 ntBASIC30.18■■■□□ 2.42
UBE3BQ7Z3V4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
UBE3BQ7Z3V4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
UBE3BQ7Z3V4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.17■■■□□ 2.42
UBE3BQ7Z3V4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
UBE3BQ7Z3V4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
UBE3BQ7Z3V4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
UBE3BQ7Z3V4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
UBE3BQ7Z3V4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 AC103724.3-201ENST00000564481 992 ntBASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBE3BQ7Z3V4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 KRT18P10-201ENST00000388836 1287 ntBASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
UBE3BQ7Z3V4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
UBE3BQ7Z3V4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBE3BQ7Z3V4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBE3BQ7Z3V4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
UBE3BQ7Z3V4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.12■■■□□ 2.41
UBE3BQ7Z3V4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
UBE3BQ7Z3V4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
UBE3BQ7Z3V4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
UBE3BQ7Z3V4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
UBE3BQ7Z3V4 AC009299.2-201ENST00000482477 511 ntBASIC30.11■■■□□ 2.41
UBE3BQ7Z3V4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.11■■■□□ 2.41
UBE3BQ7Z3V4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
UBE3BQ7Z3V4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBE3BQ7Z3V4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.1■■■□□ 2.41
UBE3BQ7Z3V4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBE3BQ7Z3V4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
UBE3BQ7Z3V4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBE3BQ7Z3V4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
UBE3BQ7Z3V4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
UBE3BQ7Z3V4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
UBE3BQ7Z3V4 AL121749.1-202ENST00000609313 2153 ntBASIC30.08■■■□□ 2.41
UBE3BQ7Z3V4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.08■■■□□ 2.41
UBE3BQ7Z3V4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
UBE3BQ7Z3V4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBE3BQ7Z3V4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBE3BQ7Z3V4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.07■■■□□ 2.4
UBE3BQ7Z3V4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.07■■■□□ 2.4
UBE3BQ7Z3V4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
UBE3BQ7Z3V4 AL031848.2-201ENST00000607670 837 ntBASIC30.07■■■□□ 2.4
UBE3BQ7Z3V4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBE3BQ7Z3V4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
UBE3BQ7Z3V4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
UBE3BQ7Z3V4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBE3BQ7Z3V4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
UBE3BQ7Z3V4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms