Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
PRPF40BQ6NWY9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.34■■■□□ 2.45
PRPF40BQ6NWY9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.33■■■□□ 2.45
PRPF40BQ6NWY9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRPF40BQ6NWY9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
PRPF40BQ6NWY9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 LINC01003-201ENST00000564834 1764 ntBASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.32■■■□□ 2.44
PRPF40BQ6NWY9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
PRPF40BQ6NWY9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.31■■■□□ 2.44
PRPF40BQ6NWY9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PRPF40BQ6NWY9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PRPF40BQ6NWY9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.31■■■□□ 2.44
PRPF40BQ6NWY9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRPF40BQ6NWY9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.29■■■□□ 2.44
PRPF40BQ6NWY9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
PRPF40BQ6NWY9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PRPF40BQ6NWY9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.28■■■□□ 2.44
PRPF40BQ6NWY9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PRPF40BQ6NWY9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PRPF40BQ6NWY9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.28■■■□□ 2.44
PRPF40BQ6NWY9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PRPF40BQ6NWY9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PRPF40BQ6NWY9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.27■■■□□ 2.44
PRPF40BQ6NWY9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PRPF40BQ6NWY9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
PRPF40BQ6NWY9 KRT125P-201ENST00000546827 989 ntBASIC30.26■■■□□ 2.43
PRPF40BQ6NWY9 MIR4787-201ENST00000607364 84 ntBASIC30.26■■■□□ 2.43
PRPF40BQ6NWY9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PRPF40BQ6NWY9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
PRPF40BQ6NWY9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PRPF40BQ6NWY9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.24■■■□□ 2.43
PRPF40BQ6NWY9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PRPF40BQ6NWY9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
PRPF40BQ6NWY9 UNC93B8-201ENST00000511903 705 ntBASIC30.23■■■□□ 2.43
PRPF40BQ6NWY9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PRPF40BQ6NWY9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PRPF40BQ6NWY9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.22■■■□□ 2.43
PRPF40BQ6NWY9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.22■■■□□ 2.43
PRPF40BQ6NWY9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PRPF40BQ6NWY9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
PRPF40BQ6NWY9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PRPF40BQ6NWY9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PRPF40BQ6NWY9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PRPF40BQ6NWY9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRPF40BQ6NWY9 BX664725.1-201ENST00000438252 379 ntBASIC30.21■■■□□ 2.43
PRPF40BQ6NWY9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.21■■■□□ 2.43
PRPF40BQ6NWY9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.21■■■□□ 2.43
PRPF40BQ6NWY9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRPF40BQ6NWY9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PRPF40BQ6NWY9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PRPF40BQ6NWY9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PRPF40BQ6NWY9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.2■■■□□ 2.43
PRPF40BQ6NWY9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.2■■■□□ 2.43
PRPF40BQ6NWY9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
PRPF40BQ6NWY9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
PRPF40BQ6NWY9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.42
PRPF40BQ6NWY9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PRPF40BQ6NWY9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
PRPF40BQ6NWY9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PRPF40BQ6NWY9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PRPF40BQ6NWY9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.18■■■□□ 2.42
PRPF40BQ6NWY9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.18■■■□□ 2.42
PRPF40BQ6NWY9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.18■■■□□ 2.42
PRPF40BQ6NWY9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.18■■■□□ 2.42
PRPF40BQ6NWY9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
PRPF40BQ6NWY9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.17■■■□□ 2.42
PRPF40BQ6NWY9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PRPF40BQ6NWY9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PRPF40BQ6NWY9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PRPF40BQ6NWY9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
PRPF40BQ6NWY9 KRT16P3-201ENST00000439127 1283 ntBASIC30.16■■■□□ 2.42
PRPF40BQ6NWY9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.15■■■□□ 2.42
PRPF40BQ6NWY9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
PRPF40BQ6NWY9 AL121749.1-202ENST00000609313 2153 ntBASIC30.14■■■□□ 2.42
PRPF40BQ6NWY9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PRPF40BQ6NWY9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PRPF40BQ6NWY9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.13■■■□□ 2.41
PRPF40BQ6NWY9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRPF40BQ6NWY9 MIR638-201ENST00000385237 100 ntBASIC30.13■■■□□ 2.41
PRPF40BQ6NWY9 AC022616.5-201ENST00000518796 181 ntBASIC30.13■■■□□ 2.41
PRPF40BQ6NWY9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
PRPF40BQ6NWY9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.13■■■□□ 2.41
PRPF40BQ6NWY9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.13■■■□□ 2.41
PRPF40BQ6NWY9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms