Protein–RNA interactions for Protein: P34741

SDC2, Syndecan-2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2P34741 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDC2P34741 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.21■□□□□ 0.99
SDC2P34741 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDC2P34741 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.21■□□□□ 0.99
SDC2P34741 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDC2P34741 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SDC2P34741 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.2■□□□□ 0.99
SDC2P34741 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SDC2P34741 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SDC2P34741 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDC2P34741 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SDC2P34741 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDC2P34741 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SDC2P34741 AC136428.2-201ENST00000563187 214 ntBASIC21.2■□□□□ 0.98
SDC2P34741 LINC00543-201ENST00000567234 1845 ntBASIC21.2■□□□□ 0.98
SDC2P34741 AC110285.7-201ENST00000624417 1536 ntBASIC21.19■□□□□ 0.98
SDC2P34741 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SDC2P34741 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDC2P34741 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDC2P34741 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDC2P34741 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDC2P34741 AC079834.2-201ENST00000609776 1949 ntBASIC21.18■□□□□ 0.98
SDC2P34741 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.18■□□□□ 0.98
SDC2P34741 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SDC2P34741 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SDC2P34741 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDC2P34741 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
SDC2P34741 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.18■□□□□ 0.98
SDC2P34741 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDC2P34741 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SDC2P34741 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.17■□□□□ 0.98
SDC2P34741 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.17■□□□□ 0.98
SDC2P34741 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.17■□□□□ 0.98
SDC2P34741 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.17■□□□□ 0.98
SDC2P34741 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.17■□□□□ 0.98
SDC2P34741 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDC2P34741 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SDC2P34741 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDC2P34741 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDC2P34741 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SDC2P34741 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDC2P34741 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDC2P34741 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
SDC2P34741 AC097639.1-201ENST00000565519 1891 ntBASIC21.16■□□□□ 0.98
SDC2P34741 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDC2P34741 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDC2P34741 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.16■□□□□ 0.98
SDC2P34741 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SDC2P34741 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.16■□□□□ 0.98
SDC2P34741 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.16■□□□□ 0.98
SDC2P34741 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SDC2P34741 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SDC2P34741 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.15■□□□□ 0.98
SDC2P34741 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDC2P34741 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.15■□□□□ 0.98
SDC2P34741 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SDC2P34741 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDC2P34741 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDC2P34741 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDC2P34741 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.15■□□□□ 0.98
SDC2P34741 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDC2P34741 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDC2P34741 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDC2P34741 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDC2P34741 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.14■□□□□ 0.98
SDC2P34741 AC005559.1-201ENST00000589661 871 ntBASIC21.14■□□□□ 0.97
SDC2P34741 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDC2P34741 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDC2P34741 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
SDC2P34741 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
SDC2P34741 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDC2P34741 AC097358.2-201ENST00000607541 1159 ntBASIC21.13■□□□□ 0.97
SDC2P34741 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDC2P34741 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SDC2P34741 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDC2P34741 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.13■□□□□ 0.97
SDC2P34741 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.13■□□□□ 0.97
SDC2P34741 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDC2P34741 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SDC2P34741 AP003733.4-201ENST00000623785 1697 ntBASIC21.12■□□□□ 0.97
SDC2P34741 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDC2P34741 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDC2P34741 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SDC2P34741 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SDC2P34741 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.11■□□□□ 0.97
SDC2P34741 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDC2P34741 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.11■□□□□ 0.97
SDC2P34741 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SDC2P34741 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDC2P34741 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.1■□□□□ 0.97
SDC2P34741 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.1■□□□□ 0.97
SDC2P34741 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDC2P34741 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDC2P34741 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.1■□□□□ 0.97
SDC2P34741 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDC2P34741 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SDC2P34741 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDC2P34741 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDC2P34741 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDC2P34741 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms