Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CKS2P33552 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKS2P33552 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.58■□□□□ 0.4
CKS2P33552 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CKS2P33552 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKS2P33552 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKS2P33552 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CKS2P33552 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKS2P33552 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CKS2P33552 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CKS2P33552 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CKS2P33552 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKS2P33552 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CKS2P33552 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.57■□□□□ 0.4
CKS2P33552 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKS2P33552 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CKS2P33552 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.57■□□□□ 0.4
CKS2P33552 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.57■□□□□ 0.4
CKS2P33552 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.56■□□□□ 0.4
CKS2P33552 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS2P33552 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CKS2P33552 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS2P33552 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.56■□□□□ 0.4
CKS2P33552 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.56■□□□□ 0.4
CKS2P33552 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS2P33552 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CKS2P33552 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CKS2P33552 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CKS2P33552 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CKS2P33552 LINC01124-201ENST00000409786 2117 ntBASIC17.54■□□□□ 0.4
CKS2P33552 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKS2P33552 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKS2P33552 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKS2P33552 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKS2P33552 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKS2P33552 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKS2P33552 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKS2P33552 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CKS2P33552 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CKS2P33552 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.53■□□□□ 0.4
CKS2P33552 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CKS2P33552 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS2P33552 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CKS2P33552 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS2P33552 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS2P33552 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS2P33552 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CKS2P33552 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS2P33552 AC108673.1-201ENST00000510422 1159 ntBASIC17.52■□□□□ 0.4
CKS2P33552 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS2P33552 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CKS2P33552 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CKS2P33552 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CKS2P33552 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKS2P33552 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKS2P33552 AC068473.5-201ENST00000616428 2072 ntBASIC17.51■□□□□ 0.39
CKS2P33552 MIR762-201ENST00000390236 83 ntBASIC17.51■□□□□ 0.39
CKS2P33552 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKS2P33552 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CKS2P33552 CAHM-201ENST00000604200 896 ntBASIC17.51■□□□□ 0.39
CKS2P33552 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKS2P33552 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKS2P33552 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.51■□□□□ 0.39
CKS2P33552 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKS2P33552 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CKS2P33552 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CKS2P33552 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKS2P33552 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKS2P33552 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.5■□□□□ 0.39
CKS2P33552 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CKS2P33552 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.5■□□□□ 0.39
CKS2P33552 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKS2P33552 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKS2P33552 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKS2P33552 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKS2P33552 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CKS2P33552 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS2P33552 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CKS2P33552 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.49■□□□□ 0.39
CKS2P33552 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS2P33552 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS2P33552 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.49■□□□□ 0.39
CKS2P33552 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.49■□□□□ 0.39
CKS2P33552 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS2P33552 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS2P33552 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CKS2P33552 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS2P33552 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS2P33552 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.48■□□□□ 0.39
CKS2P33552 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS2P33552 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms