Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL8A2P25067 RPS2P7-201ENST00000447334 885 ntBASIC20.34■□□□□ 0.85
COL8A2P25067 AC103834.1-201ENST00000520383 144 ntBASIC20.34■□□□□ 0.85
COL8A2P25067 AC087393.1-201ENST00000582896 145 ntBASIC20.34■□□□□ 0.85
COL8A2P25067 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.34■□□□□ 0.85
COL8A2P25067 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
COL8A2P25067 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL8A2P25067 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL8A2P25067 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL8A2P25067 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL8A2P25067 AL121749.1-202ENST00000609313 2153 ntBASIC20.32■□□□□ 0.84
COL8A2P25067 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL8A2P25067 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.32■□□□□ 0.84
COL8A2P25067 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL8A2P25067 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.32■□□□□ 0.84
COL8A2P25067 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL8A2P25067 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL8A2P25067 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.32■□□□□ 0.84
COL8A2P25067 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL8A2P25067 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL8A2P25067 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL8A2P25067 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL8A2P25067 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL8A2P25067 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL8A2P25067 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 YBX1P4-201ENST00000392794 808 ntBASIC20.3■□□□□ 0.84
COL8A2P25067 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
COL8A2P25067 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL8A2P25067 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL8A2P25067 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL8A2P25067 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL8A2P25067 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL8A2P25067 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL8A2P25067 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL8A2P25067 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL8A2P25067 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.28■□□□□ 0.84
COL8A2P25067 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL8A2P25067 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL8A2P25067 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.28■□□□□ 0.84
COL8A2P25067 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL8A2P25067 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL8A2P25067 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.28■□□□□ 0.84
COL8A2P25067 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL8A2P25067 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL8A2P25067 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL8A2P25067 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL8A2P25067 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.27■□□□□ 0.84
COL8A2P25067 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL8A2P25067 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
COL8A2P25067 MIR4508-201ENST00000584178 70 ntBASIC20.27■□□□□ 0.84
COL8A2P25067 AL451085.2-201ENST00000605085 799 ntBASIC20.27■□□□□ 0.84
COL8A2P25067 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL8A2P25067 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL8A2P25067 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
COL8A2P25067 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL8A2P25067 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL8A2P25067 LONRF2P2-201ENST00000439212 571 ntBASIC20.26■□□□□ 0.83
COL8A2P25067 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.26■□□□□ 0.83
COL8A2P25067 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL8A2P25067 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL8A2P25067 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL8A2P25067 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL8A2P25067 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.25■□□□□ 0.83
COL8A2P25067 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.25■□□□□ 0.83
COL8A2P25067 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL8A2P25067 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL8A2P25067 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.25■□□□□ 0.83
COL8A2P25067 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL8A2P25067 KRT18P10-201ENST00000388836 1287 ntBASIC20.25■□□□□ 0.83
COL8A2P25067 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL8A2P25067 AC019171.1-201ENST00000601251 1056 ntBASIC20.25■□□□□ 0.83
COL8A2P25067 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.25■□□□□ 0.83
COL8A2P25067 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL8A2P25067 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.24■□□□□ 0.83
COL8A2P25067 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL8A2P25067 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL8A2P25067 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.24■□□□□ 0.83
COL8A2P25067 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.24■□□□□ 0.83
COL8A2P25067 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COL8A2P25067 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.23■□□□□ 0.83
COL8A2P25067 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL8A2P25067 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL8A2P25067 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
COL8A2P25067 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.23■□□□□ 0.83
COL8A2P25067 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.22■□□□□ 0.83
COL8A2P25067 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.22■□□□□ 0.83
COL8A2P25067 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COL8A2P25067 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL8A2P25067 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL8A2P25067 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL8A2P25067 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL8A2P25067 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.22■□□□□ 0.83
COL8A2P25067 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL8A2P25067 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms