Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.05■□□□□ 0.96
SMPD2O60906 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SMPD2O60906 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMPD2O60906 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.04■□□□□ 0.96
SMPD2O60906 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMPD2O60906 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SMPD2O60906 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.04■□□□□ 0.96
SMPD2O60906 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMPD2O60906 AC131212.1-201ENST00000613771 668 ntBASIC21.04■□□□□ 0.96
SMPD2O60906 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.04■□□□□ 0.96
SMPD2O60906 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMPD2O60906 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMPD2O60906 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.03■□□□□ 0.96
SMPD2O60906 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD2O60906 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SMPD2O60906 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD2O60906 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD2O60906 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD2O60906 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD2O60906 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SMPD2O60906 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD2O60906 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.02■□□□□ 0.96
SMPD2O60906 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD2O60906 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD2O60906 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.02■□□□□ 0.96
SMPD2O60906 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SMPD2O60906 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMPD2O60906 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD2O60906 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SMPD2O60906 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SMPD2O60906 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.01■□□□□ 0.95
SMPD2O60906 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD2O60906 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD2O60906 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.01■□□□□ 0.95
SMPD2O60906 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD2O60906 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD2O60906 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD2O60906 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21■□□□□ 0.95
SMPD2O60906 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21■□□□□ 0.95
SMPD2O60906 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21■□□□□ 0.95
SMPD2O60906 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD2O60906 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD2O60906 AC103834.1-201ENST00000520383 144 ntBASIC20.99■□□□□ 0.95
SMPD2O60906 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD2O60906 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD2O60906 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMPD2O60906 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMPD2O60906 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.98■□□□□ 0.95
SMPD2O60906 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.98■□□□□ 0.95
SMPD2O60906 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMPD2O60906 AC019069.1-201ENST00000610008 1333 ntBASIC20.98■□□□□ 0.95
SMPD2O60906 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMPD2O60906 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMPD2O60906 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMPD2O60906 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
SMPD2O60906 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMPD2O60906 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.96■□□□□ 0.95
SMPD2O60906 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMPD2O60906 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMPD2O60906 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMPD2O60906 MIR4508-201ENST00000584178 70 ntBASIC20.96■□□□□ 0.95
SMPD2O60906 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.96■□□□□ 0.95
SMPD2O60906 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMPD2O60906 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD2O60906 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD2O60906 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMPD2O60906 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SMPD2O60906 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.95■□□□□ 0.94
SMPD2O60906 THA1P-201ENST00000590384 1145 ntBASIC20.95■□□□□ 0.94
SMPD2O60906 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.95■□□□□ 0.94
SMPD2O60906 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.95■□□□□ 0.94
SMPD2O60906 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD2O60906 GUSBP5-201ENST00000418136 578 ntBASIC20.94■□□□□ 0.94
SMPD2O60906 PVT1_1.1-201ENST00000615125 194 ntBASIC20.94■□□□□ 0.94
SMPD2O60906 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMPD2O60906 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD2O60906 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.93■□□□□ 0.94
SMPD2O60906 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.93■□□□□ 0.94
SMPD2O60906 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.93■□□□□ 0.94
SMPD2O60906 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.93■□□□□ 0.94
SMPD2O60906 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.93■□□□□ 0.94
SMPD2O60906 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMPD2O60906 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SMPD2O60906 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.93■□□□□ 0.94
SMPD2O60906 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.92■□□□□ 0.94
SMPD2O60906 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD2O60906 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SMPD2O60906 AL031848.2-201ENST00000607670 837 ntBASIC20.92■□□□□ 0.94
SMPD2O60906 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD2O60906 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SMPD2O60906 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SMPD2O60906 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD2O60906 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD2O60906 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD2O60906 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD2O60906 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD2O60906 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD2O60906 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD2O60906 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMPD2O60906 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms