Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
CACNA1FO60840 AC010501.1-201ENST00000606270 1962 ntBASIC30.73■■■□□ 2.51
CACNA1FO60840 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.73■■■□□ 2.51
CACNA1FO60840 AC096887.2-201ENST00000623443 1957 ntBASIC30.73■■■□□ 2.51
CACNA1FO60840 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CACNA1FO60840 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CACNA1FO60840 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.72■■■□□ 2.51
CACNA1FO60840 ERN1-208ENST00000606895 2068 ntBASIC30.72■■■□□ 2.51
CACNA1FO60840 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CACNA1FO60840 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CACNA1FO60840 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC30.72■■■□□ 2.51
CACNA1FO60840 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CACNA1FO60840 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CACNA1FO60840 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CACNA1FO60840 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CACNA1FO60840 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CACNA1FO60840 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CACNA1FO60840 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CACNA1FO60840 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.7■■■□□ 2.5
CACNA1FO60840 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CACNA1FO60840 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CACNA1FO60840 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
CACNA1FO60840 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.69■■■□□ 2.5
CACNA1FO60840 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CACNA1FO60840 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.68■■■□□ 2.5
CACNA1FO60840 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.68■■■□□ 2.5
CACNA1FO60840 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CACNA1FO60840 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.67■■■□□ 2.5
CACNA1FO60840 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CACNA1FO60840 AC087393.1-201ENST00000582896 145 ntBASIC30.66■■■□□ 2.5
CACNA1FO60840 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.66■■■□□ 2.5
CACNA1FO60840 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CACNA1FO60840 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CACNA1FO60840 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CACNA1FO60840 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CACNA1FO60840 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.65■■■□□ 2.5
CACNA1FO60840 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CACNA1FO60840 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.65■■■□□ 2.5
CACNA1FO60840 MIR4508-201ENST00000584178 70 ntBASIC30.65■■■□□ 2.5
CACNA1FO60840 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.65■■■□□ 2.5
CACNA1FO60840 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CACNA1FO60840 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.65■■■□□ 2.5
CACNA1FO60840 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CACNA1FO60840 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.64■■■□□ 2.5
CACNA1FO60840 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CACNA1FO60840 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CACNA1FO60840 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.63■■■□□ 2.49
CACNA1FO60840 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CACNA1FO60840 AC139795.1-202ENST00000500444 432 ntBASIC30.63■■■□□ 2.49
CACNA1FO60840 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CACNA1FO60840 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.63■■■□□ 2.49
CACNA1FO60840 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CACNA1FO60840 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CACNA1FO60840 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CACNA1FO60840 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.63■■■□□ 2.49
CACNA1FO60840 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.62■■■□□ 2.49
CACNA1FO60840 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CACNA1FO60840 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CACNA1FO60840 RPS2P7-201ENST00000447334 885 ntBASIC30.62■■■□□ 2.49
CACNA1FO60840 PVT1_1.1-201ENST00000615125 194 ntBASIC30.62■■■□□ 2.49
CACNA1FO60840 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CACNA1FO60840 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.62■■■□□ 2.49
CACNA1FO60840 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.61■■■□□ 2.49
CACNA1FO60840 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
CACNA1FO60840 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CACNA1FO60840 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.61■■■□□ 2.49
CACNA1FO60840 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CACNA1FO60840 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CACNA1FO60840 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CACNA1FO60840 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CACNA1FO60840 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CACNA1FO60840 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CACNA1FO60840 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.59■■■□□ 2.49
CACNA1FO60840 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.59■■■□□ 2.49
CACNA1FO60840 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
CACNA1FO60840 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CACNA1FO60840 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.59■■■□□ 2.49
CACNA1FO60840 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CACNA1FO60840 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CACNA1FO60840 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CACNA1FO60840 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CACNA1FO60840 DUSP8P4-201ENST00000399538 1761 ntBASIC30.56■■■□□ 2.48
CACNA1FO60840 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
CACNA1FO60840 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CACNA1FO60840 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CACNA1FO60840 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CACNA1FO60840 DUX4L18-201ENST00000553347 1267 ntBASIC30.55■■■□□ 2.48
CACNA1FO60840 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CACNA1FO60840 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CACNA1FO60840 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.55■■■□□ 2.48
CACNA1FO60840 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CACNA1FO60840 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CACNA1FO60840 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.54■■■□□ 2.48
CACNA1FO60840 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.54■■■□□ 2.48
CACNA1FO60840 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CACNA1FO60840 AC074183.2-201ENST00000623112 922 ntBASIC30.53■■■□□ 2.48
CACNA1FO60840 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.53■■■□□ 2.48
CACNA1FO60840 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CACNA1FO60840 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.52■■■□□ 2.48
CACNA1FO60840 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms