Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LONRF2P2-201ENST00000439212 571 ntBASIC23.87■■□□□ 1.41
PCDHGA12O60330 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHGA12O60330 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGA12O60330 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA12O60330 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.86■■□□□ 1.41
PCDHGA12O60330 AC239859.2-201ENST00000444165 318 ntBASIC23.86■■□□□ 1.41
PCDHGA12O60330 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PCDHGA12O60330 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHGA12O60330 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA12O60330 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHGA12O60330 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA12O60330 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA12O60330 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PCDHGA12O60330 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA12O60330 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA12O60330 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHGA12O60330 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA12O60330 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHGA12O60330 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PCDHGA12O60330 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
PCDHGA12O60330 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHGA12O60330 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHGA12O60330 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHGA12O60330 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA12O60330 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
PCDHGA12O60330 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA12O60330 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHGA12O60330 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA12O60330 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHGA12O60330 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHGA12O60330 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA12O60330 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PCDHGA12O60330 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHGA12O60330 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PCDHGA12O60330 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA12O60330 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA12O60330 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA12O60330 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA12O60330 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHGA12O60330 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA12O60330 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDHGA12O60330 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA12O60330 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA12O60330 KRT18P10-201ENST00000388836 1287 ntBASIC23.79■■□□□ 1.4
PCDHGA12O60330 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA12O60330 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHGA12O60330 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA12O60330 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA12O60330 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA12O60330 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA12O60330 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PCDHGA12O60330 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA12O60330 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA12O60330 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PCDHGA12O60330 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHGA12O60330 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA12O60330 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
PCDHGA12O60330 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGA12O60330 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGA12O60330 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA12O60330 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGA12O60330 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGA12O60330 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGA12O60330 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA12O60330 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHGA12O60330 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHGA12O60330 AC022616.5-201ENST00000518796 181 ntBASIC23.76■■□□□ 1.39
PCDHGA12O60330 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDHGA12O60330 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA12O60330 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA12O60330 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGA12O60330 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGA12O60330 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGA12O60330 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA12O60330 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHGA12O60330 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA12O60330 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA12O60330 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA12O60330 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.74■■□□□ 1.39
PCDHGA12O60330 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHGA12O60330 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA12O60330 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.73■■□□□ 1.39
PCDHGA12O60330 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA12O60330 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA12O60330 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA12O60330 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA12O60330 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA12O60330 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA12O60330 KRT125P-201ENST00000546827 989 ntBASIC23.72■■□□□ 1.39
PCDHGA12O60330 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA12O60330 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
PCDHGA12O60330 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA12O60330 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 1043.5 ms