Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV4-28A0A0C4DH34 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.35■□□□□ 0.37
IGHV4-28A0A0C4DH34 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.35■□□□□ 0.37
IGHV4-28A0A0C4DH34 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV4-28A0A0C4DH34 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IGHV4-28A0A0C4DH34 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGHV4-28A0A0C4DH34 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV4-28A0A0C4DH34 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV4-28A0A0C4DH34 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV4-28A0A0C4DH34 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.34■□□□□ 0.37
IGHV4-28A0A0C4DH34 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGHV4-28A0A0C4DH34 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
IGHV4-28A0A0C4DH34 AC074183.2-201ENST00000623112 922 ntBASIC17.34■□□□□ 0.37
IGHV4-28A0A0C4DH34 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
IGHV4-28A0A0C4DH34 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV4-28A0A0C4DH34 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.32■□□□□ 0.36
IGHV4-28A0A0C4DH34 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.32■□□□□ 0.36
IGHV4-28A0A0C4DH34 AL121749.1-202ENST00000609313 2153 ntBASIC17.32■□□□□ 0.36
IGHV4-28A0A0C4DH34 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV4-28A0A0C4DH34 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV4-28A0A0C4DH34 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 KRT18P10-201ENST00000388836 1287 ntBASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 RPS2P7-201ENST00000447334 885 ntBASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 RARRES2P1-201ENST00000474487 481 ntBASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV4-28A0A0C4DH34 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 AC087393.1-201ENST00000582896 145 ntBASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 KRT8P33-201ENST00000508125 1423 ntBASIC17.3■□□□□ 0.36
IGHV4-28A0A0C4DH34 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IGHV4-28A0A0C4DH34 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV4-28A0A0C4DH34 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV4-28A0A0C4DH34 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV4-28A0A0C4DH34 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV4-28A0A0C4DH34 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV4-28A0A0C4DH34 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGHV4-28A0A0C4DH34 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV4-28A0A0C4DH34 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV4-28A0A0C4DH34 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.27■□□□□ 0.36
IGHV4-28A0A0C4DH34 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV4-28A0A0C4DH34 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGHV4-28A0A0C4DH34 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 PVT1_1.1-201ENST00000615125 194 ntBASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGHV4-28A0A0C4DH34 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 YBX1P4-201ENST00000392794 808 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms