Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A12P48065 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC6A12P48065 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A12P48065 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 SLC22A20-204ENST00000530038 1673 ntBASIC16.34■□□□□ 0.21
SLC6A12P48065 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC6A12P48065 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 AL031284.1-201ENST00000419297 478 ntBASIC16.34■□□□□ 0.21
SLC6A12P48065 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC6A12P48065 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AL049840.3-201ENST00000602669 611 ntBASIC16.34■□□□□ 0.21
SLC6A12P48065 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AC117500.6-201ENST00000624871 588 ntBASIC16.34■□□□□ 0.21
SLC6A12P48065 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SLC6A12P48065 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC6A12P48065 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC6A12P48065 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A12P48065 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A12P48065 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.33■□□□□ 0.21
SLC6A12P48065 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A12P48065 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC6A12P48065 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A12P48065 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A12P48065 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A12P48065 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC6A12P48065 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SLC6A12P48065 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC6A12P48065 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A12P48065 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 MRPL3P1-201ENST00000400109 1033 ntBASIC16.33■□□□□ 0.2
SLC6A12P48065 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 PMS2P1-201ENST00000431037 1228 ntBASIC16.33■□□□□ 0.2
SLC6A12P48065 AC108073.2-201ENST00000464002 357 ntBASIC16.33■□□□□ 0.2
SLC6A12P48065 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC6A12P48065 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A12P48065 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A12P48065 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC6A12P48065 OR7E47P-204ENST00000575924 449 ntBASIC16.33■□□□□ 0.2
SLC6A12P48065 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A12P48065 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC6A12P48065 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC6A12P48065 AC129492.6-201ENST00000611383 1305 ntBASIC16.33■□□□□ 0.2
SLC6A12P48065 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 AL353732.1-201ENST00000569618 1459 ntBASIC16.33■□□□□ 0.2
SLC6A12P48065 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC6A12P48065 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC6A12P48065 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC6A12P48065 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC6A12P48065 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC6A12P48065 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC6A12P48065 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC6A12P48065 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC6A12P48065 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.32■□□□□ 0.2
SLC6A12P48065 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC6A12P48065 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms