RNA–Protein interactions for RNA: ENST00000349499.2

CLIC6-201, Transcript of chloride intracellular channel 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLIC6, Length 3,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC6-201ENST00000349499 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
CLIC6-201ENST00000349499 DCAF8L2P0C7V8 631 aa30.02■■■□□ 2.4
CLIC6-201ENST00000349499 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
CLIC6-201ENST00000349499 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
CLIC6-201ENST00000349499 PCGF6Q9BYE7 350 aa28.82■■■□□ 2.2
CLIC6-201ENST00000349499 EHMT2Q96KQ7 1210 aa28.79■■■□□ 2.2
CLIC6-201ENST00000349499 HRCP23327 699 aa28.78■■■□□ 2.2
CLIC6-201ENST00000349499 PPARGC1BQ86YN6 1023 aaKnown RBP28.68■■■□□ 2.18
CLIC6-201ENST00000349499 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
CLIC6-201ENST00000349499 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
CLIC6-201ENST00000349499 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
CLIC6-201ENST00000349499 LOC105371045A0A1W2PR82 267 aa27.91■■■□□ 2.06
CLIC6-201ENST00000349499 TTBK1Q5TCY1 1321 aaPredicted RBP27.81■■■□□ 2.04
CLIC6-201ENST00000349499 TRIM26Q12899 539 aaPredicted RBP27.47■■□□□ 1.99
CLIC6-201ENST00000349499 PELP1Q8IZL8 1130 aaKnown RBP27.46■■□□□ 1.99
CLIC6-201ENST00000349499 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
CLIC6-201ENST00000349499 SCAF1Q9H7N4 1312 aaKnown RBP27.27■■□□□ 1.96
CLIC6-201ENST00000349499 ZEB1P37275 1124 aaPredicted RBP27.11■■□□□ 1.93
CLIC6-201ENST00000349499 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
CLIC6-201ENST00000349499 CCER1Q8TC90 406 aaPredicted RBP27.03■■□□□ 1.92
CLIC6-201ENST00000349499 RANGAP1P46060 587 aaPredicted RBP26.96■■□□□ 1.91
CLIC6-201ENST00000349499 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
CLIC6-201ENST00000349499 YTHDC1Q96MU7 727 aaKnown RBP26.84■■□□□ 1.89
CLIC6-201ENST00000349499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.75■■□□□ 1.87
CLIC6-201ENST00000349499 ABCC9O60706 1549 aa26.74■■□□□ 1.87
CLIC6-201ENST00000349499 NEUROD1Q13562 356 aa26.7■■□□□ 1.86
CLIC6-201ENST00000349499 GTF3C3Q9Y5Q9 886 aa26.69■■□□□ 1.86
CLIC6-201ENST00000349499 ACIN1Q9UKV3 1341 aaKnown RBP26.64■■□□□ 1.85
CLIC6-201ENST00000349499 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
CLIC6-201ENST00000349499 CENPBP07199 599 aaPredicted RBP26.57■■□□□ 1.84
CLIC6-201ENST00000349499 UBTFP17480 764 aaKnown RBP26.52■■□□□ 1.84
CLIC6-201ENST00000349499 DIEXFQ68CQ4 756 aaKnown RBP26.47■■□□□ 1.83
CLIC6-201ENST00000349499 APLP2Q06481 763 aa26.36■■□□□ 1.81
CLIC6-201ENST00000349499 HNRNPUL2Q1KMD3 747 aaKnown RBP26.27■■□□□ 1.8
CLIC6-201ENST00000349499 MYT1Q01538 1121 aa26.27■■□□□ 1.8
CLIC6-201ENST00000349499 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
CLIC6-201ENST00000349499 ITGAEP38570 1179 aa25.96■■□□□ 1.75
CLIC6-201ENST00000349499 ATP1B4Q9UN42 357 aaPredicted RBP25.88■■□□□ 1.73
CLIC6-201ENST00000349499 ZNF316A6NFI3 1004 aaPredicted RBP25.83■■□□□ 1.73
CLIC6-201ENST00000349499 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
CLIC6-201ENST00000349499 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
CLIC6-201ENST00000349499 MIER1Q8N108 512 aa25.77■■□□□ 1.72
CLIC6-201ENST00000349499 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
CLIC6-201ENST00000349499 BCANQ96GW7 911 aa25.51■■□□□ 1.67
CLIC6-201ENST00000349499 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
CLIC6-201ENST00000349499 CSRNP3Q8WYN3 585 aa25.31■■□□□ 1.64
CLIC6-201ENST00000349499 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
CLIC6-201ENST00000349499 CEP162Q5TB80 1403 aa25.23■■□□□ 1.63
CLIC6-201ENST00000349499 NEFLP07196 543 aa25.21■■□□□ 1.63
CLIC6-201ENST00000349499 SUPT16HQ9Y5B9 1047 aaKnown RBP25.19■■□□□ 1.62
CLIC6-201ENST00000349499 ERICH6Q7L0X2 663 aa25.12■■□□□ 1.61
CLIC6-201ENST00000349499 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
CLIC6-201ENST00000349499 SOGA1O94964 1423 aa25.03■■□□□ 1.6
CLIC6-201ENST00000349499 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
CLIC6-201ENST00000349499 ANP32EQ9BTT0 268 aa25.02■■□□□ 1.6
CLIC6-201ENST00000349499 TSHZ2Q9NRE2 1034 aa25.01■■□□□ 1.59
CLIC6-201ENST00000349499 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
CLIC6-201ENST00000349499 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
CLIC6-201ENST00000349499 HIRIP3Q9BW71 556 aaPredicted RBP24.98■■□□□ 1.59
CLIC6-201ENST00000349499 POLR3GLQ9BT43 218 aa24.97■■□□□ 1.59
CLIC6-201ENST00000349499 BCL11AQ9H165 835 aa24.97■■□□□ 1.59
CLIC6-201ENST00000349499 P3H3Q8IVL6 736 aa24.97■■□□□ 1.59
CLIC6-201ENST00000349499 NACADO15069 1562 aa24.96■■□□□ 1.59
CLIC6-201ENST00000349499 FKBP8Q14318 412 aa24.9■■□□□ 1.58
CLIC6-201ENST00000349499 WIZO95785 1651 aa24.9■■□□□ 1.58
CLIC6-201ENST00000349499 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.57
CLIC6-201ENST00000349499 KCNH8Q96L42 1107 aa24.88■■□□□ 1.57
CLIC6-201ENST00000349499 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
CLIC6-201ENST00000349499 RUSC2Q8N2Y8 1516 aa24.84■■□□□ 1.57
CLIC6-201ENST00000349499 DDX10Q13206 875 aaKnown RBP24.83■■□□□ 1.57
CLIC6-201ENST00000349499 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
CLIC6-201ENST00000349499 CLSPNQ9HAW4 1339 aa24.69■■□□□ 1.54
CLIC6-201ENST00000349499 CLIP1P30622 1438 aa24.66■■□□□ 1.54
CLIC6-201ENST00000349499 ARID3CA6NKF2 412 aa24.66■■□□□ 1.54
CLIC6-201ENST00000349499 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
CLIC6-201ENST00000349499 IRX6P78412 446 aaPredicted RBP24.62■■□□□ 1.53
CLIC6-201ENST00000349499 ANP32CO43423 234 aa24.56■■□□□ 1.52
CLIC6-201ENST00000349499 RBM19Q9Y4C8 960 aaKnown RBP24.55■■□□□ 1.52
CLIC6-201ENST00000349499 SENP3-EIF4A1A0A087X0R7 540 aa24.55■■□□□ 1.52
CLIC6-201ENST00000349499 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
CLIC6-201ENST00000349499 KANK4Q5T7N3 995 aaPredicted RBP24.45■■□□□ 1.51
CLIC6-201ENST00000349499 ZNF326Q5BKZ1 582 aaKnown RBP24.44■■□□□ 1.5
CLIC6-201ENST00000349499 SIN3AQ96ST3 1273 aa24.44■■□□□ 1.5
CLIC6-201ENST00000349499 EEA1Q15075 1411 aa24.43■■□□□ 1.5
CLIC6-201ENST00000349499 VPS8Q8N3P4 1428 aa24.39■■□□□ 1.5
CLIC6-201ENST00000349499 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.49
CLIC6-201ENST00000349499 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
CLIC6-201ENST00000349499 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
CLIC6-201ENST00000349499 CHIC2Q9UKJ5 165 aa24.29■■□□□ 1.48
CLIC6-201ENST00000349499 FAM9BQ8IZU0 186 aa24.28■■□□□ 1.48
CLIC6-201ENST00000349499 CDK11AQ9UQ88 783 aaPredicted RBP24.27■■□□□ 1.48
CLIC6-201ENST00000349499 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
CLIC6-201ENST00000349499 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
CLIC6-201ENST00000349499 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
CLIC6-201ENST00000349499 MSH5O43196 834 aa24.17■■□□□ 1.46
CLIC6-201ENST00000349499 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
CLIC6-201ENST00000349499 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
CLIC6-201ENST00000349499 SALL2Q9Y467 1007 aaPredicted RBP24.15■■□□□ 1.46
CLIC6-201ENST00000349499 NBR1Q14596 966 aa24.13■■□□□ 1.45
CLIC6-201ENST00000349499 TONSLQ96HA7 1378 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms