Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PTPN7P35236 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
PTPN7P35236 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN7P35236 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN7P35236 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN7P35236 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN7P35236 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN7P35236 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN7P35236 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN7P35236 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN7P35236 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PTPN7P35236 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 TOP3BP1-201ENST00000420768 1380 ntBASIC17.56■□□□□ 0.4
PTPN7P35236 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN7P35236 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN7P35236 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN7P35236 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
PTPN7P35236 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN7P35236 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN7P35236 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN7P35236 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PTPN7P35236 AL355877.3-201ENST00000622820 899 ntBASIC17.56■□□□□ 0.4
PTPN7P35236 AC093458.2-201ENST00000623150 629 ntBASIC17.56■□□□□ 0.4
PTPN7P35236 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN7P35236 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN7P35236 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN7P35236 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN7P35236 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN7P35236 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PTPN7P35236 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN7P35236 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN7P35236 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PTPN7P35236 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PTPN7P35236 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 ARMC10P1-201ENST00000313754 855 ntBASIC17.55■□□□□ 0.4
PTPN7P35236 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN7P35236 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN7P35236 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN7P35236 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN7P35236 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
PTPN7P35236 AL732292.2-201ENST00000609649 430 ntBASIC17.55■□□□□ 0.4
PTPN7P35236 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN7P35236 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN7P35236 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN7P35236 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN7P35236 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN7P35236 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PTPN7P35236 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 AC026691.1-201ENST00000602502 2017 ntBASIC17.54■□□□□ 0.4
PTPN7P35236 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PTPN7P35236 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN7P35236 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.54■□□□□ 0.4
PTPN7P35236 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms