Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 AL845331.1-201ENST00000424978 1190 ntBASIC17.38■□□□□ 0.37
MT-ND3P03897 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
MT-ND3P03897 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.38■□□□□ 0.37
MT-ND3P03897 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.38■□□□□ 0.37
MT-ND3P03897 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MT-ND3P03897 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND3P03897 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND3P03897 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.37■□□□□ 0.37
MT-ND3P03897 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
MT-ND3P03897 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MT-ND3P03897 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 AC006449.5-201ENST00000610658 2098 ntBASIC17.37■□□□□ 0.37
MT-ND3P03897 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MT-ND3P03897 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.37■□□□□ 0.37
MT-ND3P03897 AC109462.3-201ENST00000573934 613 ntBASIC17.37■□□□□ 0.37
MT-ND3P03897 IFNL4P1-201ENST00000607083 540 ntBASIC17.37■□□□□ 0.37
MT-ND3P03897 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.37■□□□□ 0.37
MT-ND3P03897 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
MT-ND3P03897 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MT-ND3P03897 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MT-ND3P03897 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND3P03897 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MT-ND3P03897 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND3P03897 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MT-ND3P03897 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.36■□□□□ 0.37
MT-ND3P03897 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
MT-ND3P03897 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-ND3P03897 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 KRT17P6-201ENST00000453795 1220 ntBASIC17.36■□□□□ 0.37
MT-ND3P03897 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-ND3P03897 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 AC074051.2-201ENST00000565115 352 ntBASIC17.36■□□□□ 0.37
MT-ND3P03897 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.36■□□□□ 0.37
MT-ND3P03897 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.36■□□□□ 0.37
MT-ND3P03897 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND3P03897 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND3P03897 AC233702.3-201ENST00000578656 1387 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms