RNA–Protein interactions for RNA: ENST00000509581.5

PDCD6-207, Transcript of programmed cell death 6, humanhuman

TSL 1 (best) BASIC

Gene PDCD6, Length 1,156 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-207ENST00000509581 NISCHQ9Y2I1 1504 aa43.17■■■■■ 4.5
PDCD6-207ENST00000509581 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
PDCD6-207ENST00000509581 ABCC9O60706 1549 aa37.13■■■■□ 3.53
PDCD6-207ENST00000509581 ZCCHC6Q5VYS8 1495 aaKnown RBP36.03■■■■□ 3.36
PDCD6-207ENST00000509581 NACADO15069 1562 aa35.99■■■■□ 3.35
PDCD6-207ENST00000509581 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
PDCD6-207ENST00000509581 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
PDCD6-207ENST00000509581 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
PDCD6-207ENST00000509581 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
PDCD6-207ENST00000509581 UNC13AQ9UPW8 1703 aa35.15■■■■□ 3.22
PDCD6-207ENST00000509581 SCRIBQ14160 1630 aa34.95■■■■□ 3.18
PDCD6-207ENST00000509581 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
PDCD6-207ENST00000509581 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
PDCD6-207ENST00000509581 SHROOM4Q9ULL8 1493 aa34.58■■■■□ 3.13
PDCD6-207ENST00000509581 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
PDCD6-207ENST00000509581 DNAJC5BQ9UF47 199 aa33.66■■■□□ 2.98
PDCD6-207ENST00000509581 CC2D2AQ9P2K1 1620 aa33.65■■■□□ 2.98
PDCD6-207ENST00000509581 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.96
PDCD6-207ENST00000509581 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
PDCD6-207ENST00000509581 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
PDCD6-207ENST00000509581 SMARCA2P51531 1590 aa33.26■■■□□ 2.91
PDCD6-207ENST00000509581 MROH2BQ7Z745 1585 aa33.22■■■□□ 2.91
PDCD6-207ENST00000509581 ATAD2BQ9ULI0 1458 aa33.17■■■□□ 2.9
PDCD6-207ENST00000509581 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
PDCD6-207ENST00000509581 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
PDCD6-207ENST00000509581 HMGXB3Q12766 1538 aa33.06■■■□□ 2.88
PDCD6-207ENST00000509581 BAZ1BQ9UIG0 1483 aaKnown RBP32.98■■■□□ 2.87
PDCD6-207ENST00000509581 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
PDCD6-207ENST00000509581 WIZO95785 1651 aa32.94■■■□□ 2.86
PDCD6-207ENST00000509581 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
PDCD6-207ENST00000509581 SUPT5HO00267 1087 aaKnown RBP32.32■■■□□ 2.76
PDCD6-207ENST00000509581 LAMC3Q9Y6N6 1575 aa32.3■■■□□ 2.76
PDCD6-207ENST00000509581 CCDC88BA6NC98 1476 aa32.18■■■□□ 2.74
PDCD6-207ENST00000509581 CADPSQ9ULU8 1353 aa32.18■■■□□ 2.74
PDCD6-207ENST00000509581 NESP48681 1621 aa32.17■■■□□ 2.74
PDCD6-207ENST00000509581 ERCC6Q03468 1493 aa32.08■■■□□ 2.73
PDCD6-207ENST00000509581 PDS5BQ9NTI5 1447 aa32.05■■■□□ 2.72
PDCD6-207ENST00000509581 CFTRP13569 1480 aa32.04■■■□□ 2.72
PDCD6-207ENST00000509581 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
PDCD6-207ENST00000509581 KIF21AQ7Z4S6 1674 aa31.93■■■□□ 2.7
PDCD6-207ENST00000509581 FANCD2Q9BXW9 1451 aa31.82■■■□□ 2.68
PDCD6-207ENST00000509581 CEP164Q9UPV0 1460 aa31.8■■■□□ 2.68
PDCD6-207ENST00000509581 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
PDCD6-207ENST00000509581 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
PDCD6-207ENST00000509581 CUX2O14529 1486 aa31.65■■■□□ 2.66
PDCD6-207ENST00000509581 WDR62O43379 1518 aa31.56■■■□□ 2.64
PDCD6-207ENST00000509581 ABCC8Q09428 1581 aa31.46■■■□□ 2.63
PDCD6-207ENST00000509581 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
PDCD6-207ENST00000509581 DNMBPQ6XZF7 1577 aa31.38■■■□□ 2.61
PDCD6-207ENST00000509581 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
PDCD6-207ENST00000509581 CUX1P39880 1505 aa31.17■■■□□ 2.58
PDCD6-207ENST00000509581 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
PDCD6-207ENST00000509581 IFT140Q96RY7 1462 aa31.12■■■□□ 2.57
PDCD6-207ENST00000509581 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
PDCD6-207ENST00000509581 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
PDCD6-207ENST00000509581 TOP2BQ02880 1626 aa31.06■■■□□ 2.56
PDCD6-207ENST00000509581 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
PDCD6-207ENST00000509581 SYNJ1O43426 1573 aa31■■■□□ 2.55
PDCD6-207ENST00000509581 TARBP1Q13395 1621 aaKnown RBP30.98■■■□□ 2.55
PDCD6-207ENST00000509581 SOGA1O94964 1423 aa30.97■■■□□ 2.55
PDCD6-207ENST00000509581 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
PDCD6-207ENST00000509581 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.53
PDCD6-207ENST00000509581 EIF4G3O43432 1585 aaKnown RBP30.84■■■□□ 2.53
PDCD6-207ENST00000509581 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
PDCD6-207ENST00000509581 ABCA10Q8WWZ4 1543 aa30.79■■■□□ 2.52
PDCD6-207ENST00000509581 AQRO60306 1485 aaKnown RBP eCLIP30.7■■■□□ 2.51
PDCD6-207ENST00000509581 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.51
PDCD6-207ENST00000509581 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
PDCD6-207ENST00000509581 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
PDCD6-207ENST00000509581 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
PDCD6-207ENST00000509581 GRIN2BQ13224 1484 aa30.61■■■□□ 2.49
PDCD6-207ENST00000509581 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
PDCD6-207ENST00000509581 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
PDCD6-207ENST00000509581 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
PDCD6-207ENST00000509581 KIF27Q86VH2 1401 aa30.48■■■□□ 2.47
PDCD6-207ENST00000509581 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
PDCD6-207ENST00000509581 CHD1O14646 1710 aa30.44■■■□□ 2.46
PDCD6-207ENST00000509581 SYNJ2O15056 1496 aa30.38■■■□□ 2.45
PDCD6-207ENST00000509581 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
PDCD6-207ENST00000509581 FBLN2P98095 1184 aa30.34■■■□□ 2.45
PDCD6-207ENST00000509581 OSCARQ8IYS5 282 aa30.34■■■□□ 2.45
PDCD6-207ENST00000509581 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
PDCD6-207ENST00000509581 CUL7Q14999 1698 aa30.31■■■□□ 2.44
PDCD6-207ENST00000509581 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
PDCD6-207ENST00000509581 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
PDCD6-207ENST00000509581 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
PDCD6-207ENST00000509581 IGF1RP08069 1367 aa30.22■■■□□ 2.43
PDCD6-207ENST00000509581 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
PDCD6-207ENST00000509581 EEA1Q15075 1411 aa30.14■■■□□ 2.42
PDCD6-207ENST00000509581 RUSC2Q8N2Y8 1516 aa30.13■■■□□ 2.41
PDCD6-207ENST00000509581 CARMIL1Q5VZK9 1371 aa30.11■■■□□ 2.41
PDCD6-207ENST00000509581 CLASP1Q7Z460 1538 aa30.04■■■□□ 2.4
PDCD6-207ENST00000509581 NUP160Q12769 1436 aa30.03■■■□□ 2.4
PDCD6-207ENST00000509581 CEP170Q5SW79 1584 aa30.01■■■□□ 2.39
PDCD6-207ENST00000509581 RAPGEF2Q9Y4G8 1499 aa29.99■■■□□ 2.39
PDCD6-207ENST00000509581 CSRNP3Q8WYN3 585 aa29.95■■■□□ 2.39
PDCD6-207ENST00000509581 PRXQ9BXM0 1461 aa29.9■■■□□ 2.38
PDCD6-207ENST00000509581 FAM9AQ8IZU1 332 aaPredicted RBP29.85■■■□□ 2.37
PDCD6-207ENST00000509581 ARHGEF11O15085 1522 aa29.84■■■□□ 2.37
PDCD6-207ENST00000509581 KIAA0586Q9BVV6 1533 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms