Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFP28Q8NHY6 IER3-202ENST00000376377 1350 ntBASIC16.5■□□□□ 0.23
ZFP28Q8NHY6 AC016734.2-201ENST00000624325 1377 ntBASIC16.5■□□□□ 0.23
ZFP28Q8NHY6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.5■□□□□ 0.23
ZFP28Q8NHY6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFP28Q8NHY6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZFP28Q8NHY6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 KRT18P1-202ENST00000452408 1331 ntBASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 PAUPAR-201ENST00000630360 2965 ntBASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 Z69720.1-201ENST00000601483 472 ntBASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 AC019129.2-201ENST00000609837 1235 ntBASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZFP28Q8NHY6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 AC060834.1-201ENST00000443027 2032 ntBASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 NFIC-211ENST00000641145 8399 ntBASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFP28Q8NHY6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.47■□□□□ 0.23
ZFP28Q8NHY6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZFP28Q8NHY6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZFP28Q8NHY6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZFP28Q8NHY6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ZFP28Q8NHY6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms