Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 AL603756.1-201ENST00000606511 2163 ntBASIC16.92■□□□□ 0.3
ZNF140P52738 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF140P52738 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ZNF140P52738 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF140P52738 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF140P52738 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ZNF140P52738 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 MRPL20P1-201ENST00000400819 433 ntBASIC16.91■□□□□ 0.3
ZNF140P52738 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
ZNF140P52738 AC108751.1-201ENST00000490852 363 ntBASIC16.91■□□□□ 0.3
ZNF140P52738 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.91■□□□□ 0.3
ZNF140P52738 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF140P52738 MPDU1-223ENST00000582151 728 ntBASIC16.91■□□□□ 0.3
ZNF140P52738 AC013467.2-201ENST00000605472 835 ntBASIC16.91■□□□□ 0.3
ZNF140P52738 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF140P52738 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF140P52738 AC004790.2-201ENST00000623588 572 ntBASIC16.91■□□□□ 0.3
ZNF140P52738 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ZNF140P52738 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF140P52738 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 AC006277.1-201ENST00000624348 1610 ntBASIC16.91■□□□□ 0.3
ZNF140P52738 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.91■□□□□ 0.3
ZNF140P52738 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF140P52738 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
ZNF140P52738 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF140P52738 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
ZNF140P52738 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF140P52738 FDX1P1-201ENST00000449115 551 ntBASIC16.9■□□□□ 0.3
ZNF140P52738 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF140P52738 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 AC091167.2-201ENST00000579581 588 ntBASIC16.9■□□□□ 0.3
ZNF140P52738 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF140P52738 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF140P52738 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.9■□□□□ 0.3
ZNF140P52738 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF140P52738 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF140P52738 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF140P52738 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF140P52738 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF140P52738 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.89■□□□□ 0.3
ZNF140P52738 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.89■□□□□ 0.3
ZNF140P52738 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF140P52738 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF140P52738 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.89■□□□□ 0.3
ZNF140P52738 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
ZNF140P52738 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
ZNF140P52738 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF140P52738 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ZNF140P52738 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF140P52738 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF140P52738 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF140P52738 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms