Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC113404.2-201ENST00000507884 177 ntBASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 GPR32P1-201ENST00000601788 811 ntBASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 IGHGP-201ENST00000390555 1178 ntBASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 AL121672.3-201ENST00000608644 468 ntBASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 AC022898.2-201ENST00000616822 1312 ntBASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
AP4B1Q9Y6B7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 AC009949.1-201ENST00000623048 1830 ntBASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 UPK3BP1-201ENST00000428678 509 ntBASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 BX276092.5-203ENST00000456199 560 ntBASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 KRT8P26-201ENST00000534154 1276 ntBASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 AC005332.3-201ENST00000589904 676 ntBASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 AC069148.1-201ENST00000608741 768 ntBASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4B1Q9Y6B7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms