Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SF3A2-207ENST00000592839 724 ntTSL 223.13■■□□□ 1.295e-8■□□□□ 8.8
DROSHAQ9NRR4 EMP3-209ENST00000599704 753 ntTSL 322.8■■□□□ 1.242e-6■□□□□ 8.8
DROSHAQ9NRR4 JPT1-210ENST00000580380 411 ntTSL 522.49■■□□□ 1.192e-6■□□□□ 8.8
DROSHAQ9NRR4 SF3A2-205ENST00000590034 573 ntTSL 322.17■■□□□ 1.145e-8■□□□□ 8.8
DROSHAQ9NRR4 EMP3-208ENST00000599255 667 ntTSL 321.57■■□□□ 1.042e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-227ENST00000455679 542 ntTSL 421.55■■□□□ 1.042e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-213ENST00000426123 2907 ntTSL 221.1■□□□□ 0.972e-6■□□□□ 8.8
DROSHAQ9NRR4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC21.08■□□□□ 0.965e-8■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.74■□□□□ 0.912e-6■□□□□ 8.8
DROSHAQ9NRR4 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC20.52■□□□□ 0.882e-6■□□□□ 8.8
DROSHAQ9NRR4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC20.25■□□□□ 0.835e-8■□□□□ 8.8
DROSHAQ9NRR4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.782e-6■□□□□ 8.8
DROSHAQ9NRR4 EMP3-204ENST00000596315 761 ntTSL 2 BASIC19.89■□□□□ 0.772e-6■□□□□ 8.8
DROSHAQ9NRR4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.775e-8■□□□□ 8.8
DROSHAQ9NRR4 JPT1-204ENST00000465454 509 ntTSL 419.81■□□□□ 0.762e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.722e-6■□□□□ 8.8
DROSHAQ9NRR4 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.722e-6■□□□□ 8.8
DROSHAQ9NRR4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.725e-8■□□□□ 8.8
DROSHAQ9NRR4 EIF4G2-211ENST00000527526 555 ntTSL 419.53■□□□□ 0.722e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC19.52■□□□□ 0.722e-6■□□□□ 8.8
DROSHAQ9NRR4 LSS-210ENST00000491729 2143 ntTSL 219.41■□□□□ 0.75e-8■□□□□ 8.8
DROSHAQ9NRR4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.682e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC19.11■□□□□ 0.652e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.92■□□□□ 0.622e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-214ENST00000427141 730 ntTSL 518.76■□□□□ 0.592e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)18.09■□□□□ 0.492e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-220ENST00000440448 578 ntTSL 416.88■□□□□ 0.292e-6■□□□□ 8.8
DROSHAQ9NRR4 PNRC2-203ENST00000471915 380 ntTSL 316.85■□□□□ 0.292e-6■□□□□ 8.8
DROSHAQ9NRR4 EMP3-207ENST00000597529 437 ntTSL 216.79■□□□□ 0.282e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-223ENST00000444134 558 ntTSL 516.54■□□□□ 0.242e-6■□□□□ 8.8
DROSHAQ9NRR4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.25e-8■□□□□ 8.8
DROSHAQ9NRR4 EMP3-202ENST00000593437 502 ntTSL 516.24■□□□□ 0.192e-6■□□□□ 8.8
DROSHAQ9NRR4 EMP3-203ENST00000594198 263 ntTSL 216.13■□□□□ 0.172e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC15.95■□□□□ 0.142e-6■□□□□ 8.8
DROSHAQ9NRR4 EMP3-206ENST00000597279 683 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.142e-6■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.133e-8■□□□□ 8.8
DROSHAQ9NRR4 PPT2-EGFL8-205ENST00000479001 944 ntTSL 515.77■□□□□ 0.122e-6■□□□□ 8.8
DROSHAQ9NRR4 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.032e-6■□□□□ 8.8
DROSHAQ9NRR4 LSS-203ENST00000419093 517 ntTSL 315.02■□□□□ -05e-8■□□□□ 8.8
DROSHAQ9NRR4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.8□□□□□ -0.045e-8■□□□□ 8.8
DROSHAQ9NRR4 LSS-208ENST00000474319 3601 ntTSL 214.49□□□□□ -0.095e-8■□□□□ 8.8
DROSHAQ9NRR4 SLC26A6-216ENST00000469693 574 ntTSL 314.2□□□□□ -0.141e-9■□□□□ 8.8
DROSHAQ9NRR4 LBR-205ENST00000425080 874 ntTSL 314.07□□□□□ -0.162e-6■□□□□ 8.8
DROSHAQ9NRR4 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.175e-8■□□□□ 8.8
DROSHAQ9NRR4 UBE2G2-206ENST00000481546 4340 ntTSL 1 (best)13.35□□□□□ -0.272e-6■□□□□ 8.8
DROSHAQ9NRR4 JPT1-212ENST00000584079 382 ntTSL 513.27□□□□□ -0.292e-6■□□□□ 8.8
DROSHAQ9NRR4 JPT1-211ENST00000581874 517 ntTSL 5 BASIC12.87□□□□□ -0.352e-6■□□□□ 8.8
DROSHAQ9NRR4 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.492e-6■□□□□ 8.8
DROSHAQ9NRR4 EIF4G2-225ENST00000532383 6769 ntTSL 1 (best)10.73□□□□□ -0.692e-6■□□□□ 8.8
DROSHAQ9NRR4 SMG7-209ENST00000495321 556 ntTSL 310.71□□□□□ -0.692e-6■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-221ENST00000630833 567 ntTSL 48.79□□□□□ -13e-8■□□□□ 8.8
DROSHAQ9NRR4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -12e-6■□□□□ 8.8
DROSHAQ9NRR4 XIST-202ENST00000417942 724 ntTSL 37.1□□□□□ -1.272e-6■□□□□ 8.8
DROSHAQ9NRR4 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.44□□□□□ -1.382e-6■□□□□ 8.8
DROSHAQ9NRR4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.425e-8■□□□□ 8.8
DROSHAQ9NRR4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.492e-6■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-232ENST00000637544 214 ntTSL 53.76□□□□□ -1.813e-8■□□□□ 8.8
DROSHAQ9NRR4 TBL1XR1-224ENST00000635794 768 ntTSL 53.76□□□□□ -1.813e-8■□□□□ 8.8
DROSHAQ9NRR4 XIST-203ENST00000421322 446 ntTSL 21.03□□□□□ -2.242e-6■□□□□ 8.8
DROSHAQ9NRR4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC40.63■■■■■ 4.11e-6■□□□□ 8.8
DROSHAQ9NRR4 RHBDL1-203ENST00000450775 1566 ntTSL 237.92■■■■□ 3.661e-6■□□□□ 8.8
DROSHAQ9NRR4 RHBDL1-204ENST00000561556 796 ntTSL 335.9■■■■□ 3.341e-6■□□□□ 8.8
DROSHAQ9NRR4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC34.76■■■■□ 3.161e-6■□□□□ 8.8
DROSHAQ9NRR4 RPL13-208ENST00000487034 615 ntTSL 1 (best)34.68■■■■□ 3.144e-24■□□□□ 8.8
DROSHAQ9NRR4 RPL13-209ENST00000491523 698 ntTSL 334.63■■■■□ 3.134e-24■□□□□ 8.8
DROSHAQ9NRR4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC33.98■■■■□ 3.031e-6■□□□□ 8.8
DROSHAQ9NRR4 RPL13-212ENST00000563749 2367 nt32.34■■■□□ 2.774e-24■□□□□ 8.8
DROSHAQ9NRR4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.744e-24■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC31.63■■■□□ 2.651e-6■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC31.43■■■□□ 2.621e-6■□□□□ 8.8
DROSHAQ9NRR4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.611e-6■□□□□ 8.8
DROSHAQ9NRR4 SNRPE-206ENST00000483099 967 ntTSL 231.26■■■□□ 2.592e-12■□□□□ 8.8
DROSHAQ9NRR4 TXNRD2-217ENST00000496729 910 ntTSL 430.64■■■□□ 2.51e-6■□□□□ 8.8
DROSHAQ9NRR4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.61■■■□□ 2.491e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-218ENST00000441124 708 ntTSL 230.11■■■□□ 2.412e-7■□□□□ 8.8
DROSHAQ9NRR4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC29.13■■■□□ 2.251e-6■□□□□ 8.8
DROSHAQ9NRR4 LMNB2-205ENST00000532465 769 ntTSL 328.69■■■□□ 2.181e-6■□□□□ 8.8
DROSHAQ9NRR4 ELF2-205ENST00000420916 882 ntTSL 1 (best)27.84■■■□□ 2.051e-6■□□□□ 8.8
DROSHAQ9NRR4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 21e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-208ENST00000422080 578 ntTSL 327.4■■□□□ 1.982e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-212ENST00000426343 594 ntTSL 427.4■■□□□ 1.982e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-244ENST00000490697 581 ntTSL 427.4■■□□□ 1.982e-7■□□□□ 8.8
DROSHAQ9NRR4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.961e-6■□□□□ 8.8
DROSHAQ9NRR4 ELF2-212ENST00000514606 2219 ntTSL 226.89■■□□□ 1.891e-6■□□□□ 8.8
DROSHAQ9NRR4 LMNB2-202ENST00000475819 885 ntTSL 525.98■■□□□ 1.751e-6■□□□□ 8.8
DROSHAQ9NRR4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC25.93■■□□□ 1.741e-6■□□□□ 8.8
DROSHAQ9NRR4 RPL13-205ENST00000467736 528 ntTSL 325.82■■□□□ 1.724e-24■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC25.52■■□□□ 1.681e-6■□□□□ 8.8
DROSHAQ9NRR4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC25.17■■□□□ 1.621e-6■□□□□ 8.8
DROSHAQ9NRR4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.614e-24■□□□□ 8.8
DROSHAQ9NRR4 KMT5C-206ENST00000468951 661 ntTSL 325.05■■□□□ 1.62e-12■□□□□ 8.8
DROSHAQ9NRR4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC24.35■■□□□ 1.491e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-223ENST00000449864 529 ntTSL 524.19■■□□□ 1.462e-7■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC24.11■■□□□ 1.451e-6■□□□□ 8.8
DROSHAQ9NRR4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC23.98■■□□□ 1.431e-6■□□□□ 8.8
DROSHAQ9NRR4 RPL13-210ENST00000562879 958 ntTSL 1 (best)23.57■■□□□ 1.364e-24■□□□□ 8.8
DROSHAQ9NRR4 RPL13-207ENST00000484610 924 ntTSL 523.13■■□□□ 1.294e-24■□□□□ 8.8
DROSHAQ9NRR4 RPL13-211ENST00000563270 554 ntTSL 423.05■■□□□ 1.284e-24■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-212ENST00000601681 1016 ntTSL 1 (best)22.82■■□□□ 1.241e-6■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC22.71■■□□□ 1.231e-6■□□□□ 8.8
Retrieved 100 of 16,331 protein–RNA pairs in 155.7 ms