RNA–Protein interactions for RNA: ENST00000495321.1

SMG7-209, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-209ENST00000495321 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
SMG7-209ENST00000495321 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
SMG7-209ENST00000495321 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
SMG7-209ENST00000495321 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
SMG7-209ENST00000495321 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
SMG7-209ENST00000495321 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SMG7-209ENST00000495321 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
SMG7-209ENST00000495321 ADRA2BP18089 450 aa17.66■□□□□ 0.42
SMG7-209ENST00000495321 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
SMG7-209ENST00000495321 MSH5O43196 834 aa16.83■□□□□ 0.28
SMG7-209ENST00000495321 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
SMG7-209ENST00000495321 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
SMG7-209ENST00000495321 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
SMG7-209ENST00000495321 KCNA4P22459 653 aa16.08■□□□□ 0.16
SMG7-209ENST00000495321 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
SMG7-209ENST00000495321 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
SMG7-209ENST00000495321 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
SMG7-209ENST00000495321 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
SMG7-209ENST00000495321 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
SMG7-209ENST00000495321 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
SMG7-209ENST00000495321 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
SMG7-209ENST00000495321 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
SMG7-209ENST00000495321 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
SMG7-209ENST00000495321 POTEDQ86YR6 584 aa15.2■□□□□ 0.02
SMG7-209ENST00000495321 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
SMG7-209ENST00000495321 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
SMG7-209ENST00000495321 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
SMG7-209ENST00000495321 ZBTB22O15209 634 aa14.82□□□□□ -0.04
SMG7-209ENST00000495321 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
SMG7-209ENST00000495321 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
SMG7-209ENST00000495321 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
SMG7-209ENST00000495321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMG7-209ENST00000495321 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
SMG7-209ENST00000495321 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
SMG7-209ENST00000495321 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
SMG7-209ENST00000495321 ABCC9O60706 1549 aa14.44□□□□□ -0.1
SMG7-209ENST00000495321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
SMG7-209ENST00000495321 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
SMG7-209ENST00000495321 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
SMG7-209ENST00000495321 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
SMG7-209ENST00000495321 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
SMG7-209ENST00000495321 APLP2Q06481 763 aa14.15□□□□□ -0.14
SMG7-209ENST00000495321 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
SMG7-209ENST00000495321 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
SMG7-209ENST00000495321 DCAF8L2P0C7V8 631 aa14.07□□□□□ -0.16
SMG7-209ENST00000495321 CAPN15O75808 1086 aa14□□□□□ -0.17
SMG7-209ENST00000495321 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
SMG7-209ENST00000495321 ZCCHC6Q5VYS8 1495 aaKnown RBP13.97□□□□□ -0.17
SMG7-209ENST00000495321 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
SMG7-209ENST00000495321 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
SMG7-209ENST00000495321 NACADO15069 1562 aa13.92□□□□□ -0.18
SMG7-209ENST00000495321 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
SMG7-209ENST00000495321 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
SMG7-209ENST00000495321 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
SMG7-209ENST00000495321 ABCB7O75027 752 aa13.76□□□□□ -0.21
SMG7-209ENST00000495321 DSG3P32926 999 aa13.76□□□□□ -0.21
SMG7-209ENST00000495321 POLA2Q14181 598 aa13.75□□□□□ -0.21
SMG7-209ENST00000495321 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
SMG7-209ENST00000495321 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMG7-209ENST00000495321 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
SMG7-209ENST00000495321 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
SMG7-209ENST00000495321 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
SMG7-209ENST00000495321 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
SMG7-209ENST00000495321 FBLN2P98095 1184 aa13.51□□□□□ -0.25
SMG7-209ENST00000495321 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
SMG7-209ENST00000495321 FKBP8Q14318 412 aa13.33□□□□□ -0.28
SMG7-209ENST00000495321 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
SMG7-209ENST00000495321 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
SMG7-209ENST00000495321 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
SMG7-209ENST00000495321 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
SMG7-209ENST00000495321 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
SMG7-209ENST00000495321 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
SMG7-209ENST00000495321 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
SMG7-209ENST00000495321 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
SMG7-209ENST00000495321 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
SMG7-209ENST00000495321 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
SMG7-209ENST00000495321 PROM2Q8N271 834 aa13.07□□□□□ -0.32
SMG7-209ENST00000495321 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
SMG7-209ENST00000495321 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
SMG7-209ENST00000495321 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
SMG7-209ENST00000495321 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
SMG7-209ENST00000495321 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
SMG7-209ENST00000495321 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
SMG7-209ENST00000495321 NCAPD3P42695 1498 aa12.87□□□□□ -0.35
SMG7-209ENST00000495321 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
SMG7-209ENST00000495321 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
SMG7-209ENST00000495321 SMARCA2P51531 1590 aa12.85□□□□□ -0.35
SMG7-209ENST00000495321 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
SMG7-209ENST00000495321 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
SMG7-209ENST00000495321 WIZO95785 1651 aa12.83□□□□□ -0.36
SMG7-209ENST00000495321 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
SMG7-209ENST00000495321 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
SMG7-209ENST00000495321 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
SMG7-209ENST00000495321 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
SMG7-209ENST00000495321 PITPNM1O00562 1244 aa12.71□□□□□ -0.37
SMG7-209ENST00000495321 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
SMG7-209ENST00000495321 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
SMG7-209ENST00000495321 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
SMG7-209ENST00000495321 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
SMG7-209ENST00000495321 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms