RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
XIST-201ENST00000416330 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
XIST-201ENST00000416330 SENP3Q9H4L4 574 aaPredicted RBP22.73■■□□□ 1.23
XIST-201ENST00000416330 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
XIST-201ENST00000416330 FOXD1Q16676 465 aa21.11■□□□□ 0.97
XIST-201ENST00000416330 MSH5O43196 834 aa19.98■□□□□ 0.79
XIST-201ENST00000416330 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
XIST-201ENST00000416330 POTEDQ86YR6 584 aa19.78■□□□□ 0.76
XIST-201ENST00000416330 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
XIST-201ENST00000416330 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
XIST-201ENST00000416330 ADRA2BP18089 450 aa19.49■□□□□ 0.71
XIST-201ENST00000416330 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
XIST-201ENST00000416330 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
XIST-201ENST00000416330 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
XIST-201ENST00000416330 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
XIST-201ENST00000416330 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
XIST-201ENST00000416330 CACNB1Q02641 598 aaPredicted RBP17.31■□□□□ 0.36
XIST-201ENST00000416330 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
XIST-201ENST00000416330 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
XIST-201ENST00000416330 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
XIST-201ENST00000416330 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
XIST-201ENST00000416330 NCBP3Q53F19 620 aaKnown RBP16.78■□□□□ 0.28
XIST-201ENST00000416330 C1QBPQ07021 282 aaKnown RBP16.76■□□□□ 0.27
XIST-201ENST00000416330 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
XIST-201ENST00000416330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
XIST-201ENST00000416330 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
XIST-201ENST00000416330 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
XIST-201ENST00000416330 CAPN15O75808 1086 aa15.94■□□□□ 0.14
XIST-201ENST00000416330 KCNA4P22459 653 aa15.85■□□□□ 0.13
XIST-201ENST00000416330 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
XIST-201ENST00000416330 DSG3P32926 999 aa15.77■□□□□ 0.12
XIST-201ENST00000416330 APLP2Q06481 763 aa15.76■□□□□ 0.11
XIST-201ENST00000416330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
XIST-201ENST00000416330 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
XIST-201ENST00000416330 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
XIST-201ENST00000416330 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
XIST-201ENST00000416330 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
XIST-201ENST00000416330 POTEHQ6S545 545 aa15.51■□□□□ 0.07
XIST-201ENST00000416330 ABCB7O75027 752 aa15.49■□□□□ 0.07
XIST-201ENST00000416330 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
XIST-201ENST00000416330 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
XIST-201ENST00000416330 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
XIST-201ENST00000416330 POLA2Q14181 598 aa15.11■□□□□ 0.01
XIST-201ENST00000416330 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
XIST-201ENST00000416330 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
XIST-201ENST00000416330 CHRDL2Q6WN34 429 aa14.88□□□□□ -0.03
XIST-201ENST00000416330 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
XIST-201ENST00000416330 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
XIST-201ENST00000416330 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
XIST-201ENST00000416330 ZBTB22O15209 634 aa14.59□□□□□ -0.07
XIST-201ENST00000416330 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
XIST-201ENST00000416330 REM2Q8IYK8 340 aaPredicted RBP14.57□□□□□ -0.08
XIST-201ENST00000416330 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
XIST-201ENST00000416330 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
XIST-201ENST00000416330 PIP4P2Q8N4L2 257 aa14.43□□□□□ -0.1
XIST-201ENST00000416330 FBLN2P98095 1184 aa14.42□□□□□ -0.1
XIST-201ENST00000416330 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
XIST-201ENST00000416330 HAX1O00165 279 aa14.36□□□□□ -0.11
XIST-201ENST00000416330 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
XIST-201ENST00000416330 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
XIST-201ENST00000416330 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
XIST-201ENST00000416330 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
XIST-201ENST00000416330 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
XIST-201ENST00000416330 SPDYE1Q8NFV5 336 aaPredicted RBP14.17□□□□□ -0.14
XIST-201ENST00000416330 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
XIST-201ENST00000416330 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
XIST-201ENST00000416330 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
XIST-201ENST00000416330 SSUH2Q9Y2M2 353 aa14.01□□□□□ -0.17
XIST-201ENST00000416330 EVX2Q03828 476 aa13.95□□□□□ -0.18
XIST-201ENST00000416330 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
XIST-201ENST00000416330 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
XIST-201ENST00000416330 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
XIST-201ENST00000416330 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
XIST-201ENST00000416330 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
XIST-201ENST00000416330 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
XIST-201ENST00000416330 GABBR2O75899 941 aa13.74□□□□□ -0.21
XIST-201ENST00000416330 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
XIST-201ENST00000416330 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
XIST-201ENST00000416330 CLCN6P51797 869 aa13.57□□□□□ -0.24
XIST-201ENST00000416330 LHX8Q68G74 356 aa13.56□□□□□ -0.24
XIST-201ENST00000416330 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
XIST-201ENST00000416330 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
XIST-201ENST00000416330 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
XIST-201ENST00000416330 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
XIST-201ENST00000416330 SLC24A1O60721 1099 aa13.41□□□□□ -0.26
XIST-201ENST00000416330 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
XIST-201ENST00000416330 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
XIST-201ENST00000416330 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
XIST-201ENST00000416330 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
XIST-201ENST00000416330 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
XIST-201ENST00000416330 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
XIST-201ENST00000416330 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
XIST-201ENST00000416330 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
XIST-201ENST00000416330 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
XIST-201ENST00000416330 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
XIST-201ENST00000416330 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
XIST-201ENST00000416330 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
XIST-201ENST00000416330 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
XIST-201ENST00000416330 SLC39A7Q92504 469 aa12.93□□□□□ -0.34
XIST-201ENST00000416330 C7P10643 843 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms