Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 LINC01311-201ENST00000565162 1445 ntBASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
LCE3DQ9BYE3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 RNF216P1-203ENST00000404404 2427 ntBASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC4.62□□□□□ -1.67
LCE3DQ9BYE3 AC026271.3-201ENST00000571884 352 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms