RNA–Protein interactions for RNA: ENST00000366613.1

COA6-202, Transcript of cytochrome c oxidase assembly factor 6, humanhuman

TSL 1 (best) BASIC

Gene COA6, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA6-202ENST00000366613 NISCHQ9Y2I1 1504 aa50.78■■■■■ 5.72
COA6-202ENST00000366613 CCDC180Q9P1Z9 1646 aa45.45■■■■■ 4.87
COA6-202ENST00000366613 ABCC9O60706 1549 aa44.97■■■■■ 4.79
COA6-202ENST00000366613 RB1CC1Q8TDY2 1594 aa43.02■■■■■ 4.48
COA6-202ENST00000366613 NACADO15069 1562 aa42.82■■■■■ 4.44
COA6-202ENST00000366613 DCAF8L2P0C7V8 631 aa42.64■■■■■ 4.42
COA6-202ENST00000366613 MYO15BQ96JP2 1530 aa42.34■■■■■ 4.37
COA6-202ENST00000366613 ZCCHC6Q5VYS8 1495 aaKnown RBP42.22■■■■■ 4.35
COA6-202ENST00000366613 UNC13AQ9UPW8 1703 aa42.11■■■■■ 4.33
COA6-202ENST00000366613 DCAF1Q9Y4B6 1507 aa41.97■■■■■ 4.31
COA6-202ENST00000366613 PABPN1Q86U42 306 aaKnown RBP eCLIP41.89■■■■■ 4.3
COA6-202ENST00000366613 BICRAQ9NZM4 1560 aa41.73■■■■■ 4.27
COA6-202ENST00000366613 DNAJC5BQ9UF47 199 aa41.68■■■■■ 4.26
COA6-202ENST00000366613 SCRIBQ14160 1630 aa41.46■■■■■ 4.23
COA6-202ENST00000366613 SHROOM4Q9ULL8 1493 aa41.21■■■■■ 4.19
COA6-202ENST00000366613 EIF4G1Q04637 1599 aaKnown RBP40.69■■■■■ 4.1
COA6-202ENST00000366613 CC2D2AQ9P2K1 1620 aa40.67■■■■■ 4.1
COA6-202ENST00000366613 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
COA6-202ENST00000366613 SMARCA4P51532 1647 aa39.58■■■■□ 3.93
COA6-202ENST00000366613 NCAPD3P42695 1498 aa39.46■■■■□ 3.91
COA6-202ENST00000366613 ATAD2BQ9ULI0 1458 aa39.44■■■■□ 3.9
COA6-202ENST00000366613 BAZ1AQ9NRL2 1556 aaPredicted RBP39.42■■■■□ 3.9
COA6-202ENST00000366613 SMARCA2P51531 1590 aa39.39■■■■□ 3.9
COA6-202ENST00000366613 HMGXB3Q12766 1538 aa39.29■■■■□ 3.88
COA6-202ENST00000366613 MROH2BQ7Z745 1585 aa39.15■■■■□ 3.86
COA6-202ENST00000366613 PEG3Q9GZU2 1588 aa39.15■■■■□ 3.86
COA6-202ENST00000366613 BAZ1BQ9UIG0 1483 aaKnown RBP39.12■■■■□ 3.85
COA6-202ENST00000366613 ERCC6Q03468 1493 aa38.82■■■■□ 3.81
COA6-202ENST00000366613 NESP48681 1621 aa38.76■■■■□ 3.8
COA6-202ENST00000366613 WIZO95785 1651 aa38.74■■■■□ 3.79
COA6-202ENST00000366613 LAMC3Q9Y6N6 1575 aa38.57■■■■□ 3.77
COA6-202ENST00000366613 CUX2O14529 1486 aa38.57■■■■□ 3.76
COA6-202ENST00000366613 RSF1Q96T23 1441 aaPredicted RBP38.46■■■■□ 3.75
COA6-202ENST00000366613 KIF21AQ7Z4S6 1674 aa38.34■■■■□ 3.73
COA6-202ENST00000366613 THOC2Q8NI27 1593 aaKnown RBP38.32■■■■□ 3.73
COA6-202ENST00000366613 CADPSQ9ULU8 1353 aa38.3■■■■□ 3.72
COA6-202ENST00000366613 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
COA6-202ENST00000366613 TOP2AP11388 1531 aaKnown RBP38.28■■■■□ 3.72
COA6-202ENST00000366613 CFTRP13569 1480 aa37.97■■■■□ 3.67
COA6-202ENST00000366613 MRC2Q9UBG0 1479 aa37.97■■■■□ 3.67
COA6-202ENST00000366613 DNAJC5Q9H3Z4 198 aa37.94■■■■□ 3.66
COA6-202ENST00000366613 CEP164Q9UPV0 1460 aa37.93■■■■□ 3.66
COA6-202ENST00000366613 FANCD2Q9BXW9 1451 aa37.9■■■■□ 3.66
COA6-202ENST00000366613 WDR62O43379 1518 aa37.88■■■■□ 3.65
COA6-202ENST00000366613 CCDC88BA6NC98 1476 aa37.79■■■■□ 3.64
COA6-202ENST00000366613 PRDM2Q13029 1718 aa37.76■■■■□ 3.64
COA6-202ENST00000366613 URB2Q14146 1524 aaKnown RBP37.56■■■■□ 3.6
COA6-202ENST00000366613 TOPBP1Q92547 1522 aa37.25■■■■□ 3.55
COA6-202ENST00000366613 DNMBPQ6XZF7 1577 aa37.17■■■■□ 3.54
COA6-202ENST00000366613 ABCC8Q09428 1581 aa37.17■■■■□ 3.54
COA6-202ENST00000366613 IFT140Q96RY7 1462 aa37.13■■■■□ 3.53
COA6-202ENST00000366613 SUPT5HO00267 1087 aaKnown RBP37.11■■■■□ 3.53
COA6-202ENST00000366613 ZNF608Q9ULD9 1512 aaPredicted RBP37.03■■■■□ 3.52
COA6-202ENST00000366613 EIF4G3O43432 1585 aaKnown RBP36.91■■■■□ 3.5
COA6-202ENST00000366613 POLA1P09884 1462 aaPredicted RBP36.89■■■■□ 3.5
COA6-202ENST00000366613 TARBP1Q13395 1621 aaKnown RBP36.88■■■■□ 3.5
COA6-202ENST00000366613 OSCARQ8IYS5 282 aa36.81■■■■□ 3.48
COA6-202ENST00000366613 CUX1P39880 1505 aa36.77■■■■□ 3.48
COA6-202ENST00000366613 FGD5Q6ZNL6 1462 aa36.74■■■■□ 3.47
COA6-202ENST00000366613 RAD54L2Q9Y4B4 1467 aa36.74■■■■□ 3.47
COA6-202ENST00000366613 AQRO60306 1485 aaKnown RBP eCLIP36.72■■■■□ 3.472e-6■■■□□ 15.2
COA6-202ENST00000366613 SOGA1O94964 1423 aa36.69■■■■□ 3.46
COA6-202ENST00000366613 CHD1O14646 1710 aa36.56■■■■□ 3.44
COA6-202ENST00000366613 WDR97A6NE52 1622 aa36.56■■■■□ 3.44
COA6-202ENST00000366613 TDRD9Q8NDG6 1382 aaKnown RBP36.56■■■■□ 3.44
COA6-202ENST00000366613 TRIM41Q8WV44 630 aa36.54■■■■□ 3.44
COA6-202ENST00000366613 SNAPC4Q5SXM2 1469 aa36.42■■■■□ 3.42
COA6-202ENST00000366613 RIMBP3CA6NJZ7 1639 aa36.39■■■■□ 3.42
COA6-202ENST00000366613 RIMBP3BA6NNM3 1639 aa36.39■■■■□ 3.42
COA6-202ENST00000366613 RIMBP3Q9UFD9 1639 aa36.39■■■■□ 3.42
COA6-202ENST00000366613 FBLN2P98095 1184 aa36.39■■■■□ 3.42
COA6-202ENST00000366613 GRIN2BQ13224 1484 aa36.36■■■■□ 3.41
COA6-202ENST00000366613 BIVM-ERCC5R4GMW8 1640 aa36.34■■■■□ 3.41
COA6-202ENST00000366613 PBRM1Q86U86 1689 aa36.33■■■■□ 3.41
COA6-202ENST00000366613 ABCA10Q8WWZ4 1543 aa36.33■■■■□ 3.41
COA6-202ENST00000366613 MAGI1Q96QZ7 1491 aaPredicted RBP36.32■■■■□ 3.41
COA6-202ENST00000366613 TOP2BQ02880 1626 aa36.31■■■■□ 3.4
COA6-202ENST00000366613 ARHGEF11O15085 1522 aa36.31■■■■□ 3.4
COA6-202ENST00000366613 WRNQ14191 1432 aaPredicted RBP eCLIP36.31■■■■□ 3.4
COA6-202ENST00000366613 SYNJ1O43426 1573 aa36.3■■■■□ 3.4
COA6-202ENST00000366613 GAPVD1Q14C86 1478 aa36.29■■■■□ 3.4
COA6-202ENST00000366613 ABCA5Q8WWZ7 1642 aa36.28■■■■□ 3.4
COA6-202ENST00000366613 SYNJ2O15056 1496 aa36.18■■■■□ 3.38
COA6-202ENST00000366613 CHMP7Q8WUX9 453 aaPredicted RBP36.18■■■■□ 3.38
COA6-202ENST00000366613 CLASP1Q7Z460 1538 aa36.1■■■■□ 3.37
COA6-202ENST00000366613 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
COA6-202ENST00000366613 ARAP1Q96P48 1450 aa35.98■■■■□ 3.35
COA6-202ENST00000366613 CYB5RLQ6IPT4 315 aa35.94■■■■□ 3.34
COA6-202ENST00000366613 GRIN2AQ12879 1464 aa35.9■■■■□ 3.34
COA6-202ENST00000366613 ERICH3Q5RHP9 1530 aa35.89■■■■□ 3.34
COA6-202ENST00000366613 FHAD1B1AJZ9 1412 aa35.83■■■■□ 3.33
COA6-202ENST00000366613 CEP170Q5SW79 1584 aa35.76■■■■□ 3.32
COA6-202ENST00000366613 NUP160Q12769 1436 aa35.74■■■■□ 3.31
COA6-202ENST00000366613 KIF27Q86VH2 1401 aa35.59■■■■□ 3.29
COA6-202ENST00000366613 ERCC6L2Q5T890 1561 aa35.58■■■■□ 3.29
COA6-202ENST00000366613 SHROOM2Q13796 1616 aa35.57■■■■□ 3.28
COA6-202ENST00000366613 CUL7Q14999 1698 aa35.5■■■■□ 3.27
COA6-202ENST00000366613 IGF1RP08069 1367 aa35.47■■■■□ 3.27
COA6-202ENST00000366613 RUSC2Q8N2Y8 1516 aa35.47■■■■□ 3.27
COA6-202ENST00000366613 TRHP20396 242 aaPredicted RBP35.42■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms