Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.43□□□□□ -0.1
RTN4IP1Q8WWV3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AC006449.5-201ENST00000610658 2098 ntBASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 ARMC10P1-201ENST00000313754 855 ntBASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 CHCHD2P8-201ENST00000429873 447 ntBASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AL445228.2-201ENST00000605589 952 ntBASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AP000550.4-202ENST00000639755 178 ntBASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 AC092171.3-201ENST00000610122 2651 ntBASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RTN4IP1Q8WWV3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 PCDHA1-201ENST00000378133 2726 ntBASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 SLC25A1P3-201ENST00000395415 828 ntBASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AC002558.1-201ENST00000488906 803 ntBASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.41□□□□□ -0.1
RTN4IP1Q8WWV3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms