Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 KRT18P56-201ENST00000507275 550 ntBASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.11■□□□□ 0.33
CRLF3Q8IUI8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 AC004263.2-201ENST00000617183 678 ntBASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CRLF3Q8IUI8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 HCG4P8-203ENST00000443049 980 ntBASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 AC011498.5-201ENST00000592027 486 ntBASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms