Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
CRLF3Q8IUI8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CRLF3Q8IUI8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.91■■■□□ 2.86
CRLF3Q8IUI8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CRLF3Q8IUI8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.31■■■□□ 2.76
CRLF3Q8IUI8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
CRLF3Q8IUI8 AL356512.1-201ENST00000607453 1739 ntBASIC32.05■■■□□ 2.72
CRLF3Q8IUI8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CRLF3Q8IUI8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.97■■■□□ 2.71
CRLF3Q8IUI8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CRLF3Q8IUI8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CRLF3Q8IUI8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CRLF3Q8IUI8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.59■■■□□ 2.65
CRLF3Q8IUI8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.56■■■□□ 2.64
CRLF3Q8IUI8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
CRLF3Q8IUI8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CRLF3Q8IUI8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CRLF3Q8IUI8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CRLF3Q8IUI8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CRLF3Q8IUI8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.06■■■□□ 2.56
CRLF3Q8IUI8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
CRLF3Q8IUI8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
CRLF3Q8IUI8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.95■■■□□ 2.55
CRLF3Q8IUI8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CRLF3Q8IUI8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CRLF3Q8IUI8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CRLF3Q8IUI8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CRLF3Q8IUI8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
CRLF3Q8IUI8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
CRLF3Q8IUI8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CRLF3Q8IUI8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.25■■■□□ 2.43
CRLF3Q8IUI8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
CRLF3Q8IUI8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CRLF3Q8IUI8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CRLF3Q8IUI8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CRLF3Q8IUI8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
CRLF3Q8IUI8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CRLF3Q8IUI8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.9■■■□□ 2.38
CRLF3Q8IUI8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CRLF3Q8IUI8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CRLF3Q8IUI8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CRLF3Q8IUI8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
CRLF3Q8IUI8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CRLF3Q8IUI8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.68■■■□□ 2.34
CRLF3Q8IUI8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CRLF3Q8IUI8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
CRLF3Q8IUI8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CRLF3Q8IUI8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
CRLF3Q8IUI8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CRLF3Q8IUI8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.58■■■□□ 2.33
CRLF3Q8IUI8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.56■■■□□ 2.32
CRLF3Q8IUI8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CRLF3Q8IUI8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CRLF3Q8IUI8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
CRLF3Q8IUI8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.47■■■□□ 2.31
CRLF3Q8IUI8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
CRLF3Q8IUI8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CRLF3Q8IUI8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CRLF3Q8IUI8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CRLF3Q8IUI8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.37■■■□□ 2.29
CRLF3Q8IUI8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CRLF3Q8IUI8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.17■■■□□ 2.26
CRLF3Q8IUI8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
CRLF3Q8IUI8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.15■■■□□ 2.26
CRLF3Q8IUI8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CRLF3Q8IUI8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
CRLF3Q8IUI8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CRLF3Q8IUI8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CRLF3Q8IUI8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CRLF3Q8IUI8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
CRLF3Q8IUI8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CRLF3Q8IUI8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29■■■□□ 2.23
CRLF3Q8IUI8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CRLF3Q8IUI8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CRLF3Q8IUI8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CRLF3Q8IUI8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.96■■■□□ 2.23
CRLF3Q8IUI8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
CRLF3Q8IUI8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CRLF3Q8IUI8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.88■■■□□ 2.21
CRLF3Q8IUI8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.84■■■□□ 2.21
CRLF3Q8IUI8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.83■■■□□ 2.21
CRLF3Q8IUI8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.82■■■□□ 2.2
CRLF3Q8IUI8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CRLF3Q8IUI8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CRLF3Q8IUI8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CRLF3Q8IUI8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CRLF3Q8IUI8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
CRLF3Q8IUI8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CRLF3Q8IUI8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CRLF3Q8IUI8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CRLF3Q8IUI8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.69■■■□□ 2.18
CRLF3Q8IUI8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CRLF3Q8IUI8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CRLF3Q8IUI8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CRLF3Q8IUI8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CRLF3Q8IUI8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CRLF3Q8IUI8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
CRLF3Q8IUI8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
CRLF3Q8IUI8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.6■■■□□ 2.17
CRLF3Q8IUI8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms