Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CASC4Q6P4E1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.46■□□□□ 0.39
CASC4Q6P4E1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 DRAXINP1-201ENST00000437611 948 ntBASIC17.46■□□□□ 0.39
CASC4Q6P4E1 FAM210CP-201ENST00000445714 574 ntBASIC17.46■□□□□ 0.39
CASC4Q6P4E1 KRT17P6-201ENST00000453795 1220 ntBASIC17.46■□□□□ 0.39
CASC4Q6P4E1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 TPSP2-201ENST00000561760 610 ntBASIC17.46■□□□□ 0.39
CASC4Q6P4E1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.46■□□□□ 0.39
CASC4Q6P4E1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CASC4Q6P4E1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CASC4Q6P4E1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CASC4Q6P4E1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
CASC4Q6P4E1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 NSUN5P1-202ENST00000421140 1535 ntBASIC17.45■□□□□ 0.38
CASC4Q6P4E1 NSUN5P2-203ENST00000457352 1529 ntBASIC17.45■□□□□ 0.38
CASC4Q6P4E1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASC4Q6P4E1 RNF216P1-203ENST00000404404 2427 ntBASIC17.45■□□□□ 0.38
CASC4Q6P4E1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 AP002383.4-201ENST00000442518 975 ntBASIC17.44■□□□□ 0.38
CASC4Q6P4E1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 AC124947.2-201ENST00000547118 1133 ntBASIC17.44■□□□□ 0.38
CASC4Q6P4E1 AC074051.2-201ENST00000565115 352 ntBASIC17.44■□□□□ 0.38
CASC4Q6P4E1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms