RNA–Protein interactions for RNA: ENST00000379957.8

LETM2-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LETM2, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-202ENST00000379957 NISCHQ9Y2I1 1504 aa36.25■■■■□ 3.39
LETM2-202ENST00000379957 CCDC180Q9P1Z9 1646 aa31.19■■■□□ 2.58
LETM2-202ENST00000379957 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
LETM2-202ENST00000379957 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
LETM2-202ENST00000379957 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
LETM2-202ENST00000379957 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
LETM2-202ENST00000379957 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
LETM2-202ENST00000379957 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
LETM2-202ENST00000379957 ABCC9O60706 1549 aa28.86■■■□□ 2.21
LETM2-202ENST00000379957 NACADO15069 1562 aa28.83■■■□□ 2.21
LETM2-202ENST00000379957 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
LETM2-202ENST00000379957 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
LETM2-202ENST00000379957 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
LETM2-202ENST00000379957 RB1CC1Q8TDY2 1594 aa28.34■■■□□ 2.13
LETM2-202ENST00000379957 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
LETM2-202ENST00000379957 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
LETM2-202ENST00000379957 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
LETM2-202ENST00000379957 WIZO95785 1651 aa27.84■■■□□ 2.05
LETM2-202ENST00000379957 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
LETM2-202ENST00000379957 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
LETM2-202ENST00000379957 SMARCA4P51532 1647 aa27.66■■■□□ 2.02
LETM2-202ENST00000379957 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
LETM2-202ENST00000379957 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
LETM2-202ENST00000379957 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
LETM2-202ENST00000379957 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
LETM2-202ENST00000379957 HRCP23327 699 aa27.42■■□□□ 1.98
LETM2-202ENST00000379957 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
LETM2-202ENST00000379957 SMARCA2P51531 1590 aa27.36■■□□□ 1.97
LETM2-202ENST00000379957 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
LETM2-202ENST00000379957 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
LETM2-202ENST00000379957 TRIM26Q12899 539 aaPredicted RBP27.23■■□□□ 1.95
LETM2-202ENST00000379957 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
LETM2-202ENST00000379957 PABPN1Q86U42 306 aaKnown RBP eCLIP27.13■■□□□ 1.93
LETM2-202ENST00000379957 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
LETM2-202ENST00000379957 ATAD2BQ9ULI0 1458 aa26.99■■□□□ 1.91
LETM2-202ENST00000379957 EEA1Q15075 1411 aa26.94■■□□□ 1.9
LETM2-202ENST00000379957 BAZ1BQ9UIG0 1483 aaKnown RBP26.86■■□□□ 1.89
LETM2-202ENST00000379957 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
LETM2-202ENST00000379957 SOGA1O94964 1423 aa26.72■■□□□ 1.87
LETM2-202ENST00000379957 TNIKQ9UKE5 1360 aa26.68■■□□□ 1.86
LETM2-202ENST00000379957 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
LETM2-202ENST00000379957 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
LETM2-202ENST00000379957 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
LETM2-202ENST00000379957 CSRNP3Q8WYN3 585 aa26.65■■□□□ 1.86
LETM2-202ENST00000379957 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
LETM2-202ENST00000379957 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
LETM2-202ENST00000379957 CEP162Q5TB80 1403 aa26.57■■□□□ 1.84
LETM2-202ENST00000379957 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
LETM2-202ENST00000379957 RUSC2Q8N2Y8 1516 aa26.56■■□□□ 1.84
LETM2-202ENST00000379957 PPARGC1BQ86YN6 1023 aaKnown RBP26.54■■□□□ 1.84
LETM2-202ENST00000379957 KIF21BO75037 1637 aa26.51■■□□□ 1.83
LETM2-202ENST00000379957 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
LETM2-202ENST00000379957 TOP2BQ02880 1626 aa26.46■■□□□ 1.83
LETM2-202ENST00000379957 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
LETM2-202ENST00000379957 UBTFP17480 764 aaKnown RBP26.34■■□□□ 1.81
LETM2-202ENST00000379957 CFTRP13569 1480 aa26.27■■□□□ 1.8
LETM2-202ENST00000379957 PRDM2Q13029 1718 aa26.2■■□□□ 1.78
LETM2-202ENST00000379957 ERICH3Q5RHP9 1530 aa26.17■■□□□ 1.78
LETM2-202ENST00000379957 CLIP1P30622 1438 aa26.16■■□□□ 1.78
LETM2-202ENST00000379957 RAPGEF2Q9Y4G8 1499 aa26.15■■□□□ 1.78
LETM2-202ENST00000379957 CUX1P39880 1505 aa26.14■■□□□ 1.78
LETM2-202ENST00000379957 PRXQ9BXM0 1461 aa26.1■■□□□ 1.77
LETM2-202ENST00000379957 VPS8Q8N3P4 1428 aa26.08■■□□□ 1.77
LETM2-202ENST00000379957 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
LETM2-202ENST00000379957 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
LETM2-202ENST00000379957 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
LETM2-202ENST00000379957 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
LETM2-202ENST00000379957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.91■■□□□ 1.74
LETM2-202ENST00000379957 APLP2Q06481 763 aa25.83■■□□□ 1.72
LETM2-202ENST00000379957 TTBK1Q5TCY1 1321 aaPredicted RBP25.79■■□□□ 1.72
LETM2-202ENST00000379957 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
LETM2-202ENST00000379957 CUX2O14529 1486 aa25.72■■□□□ 1.71
LETM2-202ENST00000379957 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.71
LETM2-202ENST00000379957 IGF1RP08069 1367 aa25.7■■□□□ 1.7
LETM2-202ENST00000379957 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
LETM2-202ENST00000379957 DNMBPQ6XZF7 1577 aa25.64■■□□□ 1.69
LETM2-202ENST00000379957 ARHGAP35Q9NRY4 1499 aa25.62■■□□□ 1.69
LETM2-202ENST00000379957 CARMIL1Q5VZK9 1371 aa25.58■■□□□ 1.69
LETM2-202ENST00000379957 RANGAP1P46060 587 aaPredicted RBP25.55■■□□□ 1.68
LETM2-202ENST00000379957 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
LETM2-202ENST00000379957 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
LETM2-202ENST00000379957 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
LETM2-202ENST00000379957 TOPBP1Q92547 1522 aa25.52■■□□□ 1.68
LETM2-202ENST00000379957 RRBP1Q9P2E9 1410 aaKnown RBP25.49■■□□□ 1.67
LETM2-202ENST00000379957 HNRNPUL2Q1KMD3 747 aaKnown RBP25.49■■□□□ 1.67
LETM2-202ENST00000379957 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
LETM2-202ENST00000379957 CUL7Q14999 1698 aa25.43■■□□□ 1.66
LETM2-202ENST00000379957 CLSPNQ9HAW4 1339 aa25.41■■□□□ 1.66
LETM2-202ENST00000379957 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
LETM2-202ENST00000379957 NESP48681 1621 aa25.4■■□□□ 1.66
LETM2-202ENST00000379957 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
LETM2-202ENST00000379957 TIAM1Q13009 1591 aa25.36■■□□□ 1.65
LETM2-202ENST00000379957 WDR97A6NE52 1622 aa25.36■■□□□ 1.65
LETM2-202ENST00000379957 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
LETM2-202ENST00000379957 EFCAB5A4FU69 1503 aa25.33■■□□□ 1.65
LETM2-202ENST00000379957 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
LETM2-202ENST00000379957 DIEXFQ68CQ4 756 aaKnown RBP25.31■■□□□ 1.64
LETM2-202ENST00000379957 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
LETM2-202ENST00000379957 CCNB3Q8WWL7 1395 aa25.3■■□□□ 1.64
LETM2-202ENST00000379957 ZNF316A6NFI3 1004 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms