Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ARHGAP6-206ENST00000489330 6299 ntTSL 214.34□□□□□ -0.113e-6■■□□□ 11.6
CSTF2TQ9H0L4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-208ENST00000510173 782 ntTSL 313.56□□□□□ -0.244e-9■■□□□ 11.6
CSTF2TQ9H0L4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.06□□□□□ -0.324e-9■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.49□□□□□ -0.414e-9■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.444e-9■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC12.18□□□□□ -0.464e-9■■□□□ 11.6
CSTF2TQ9H0L4 ARHGAP6-205ENST00000380736 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.663e-6■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-212ENST00000532968 757 ntTSL 2 BASIC10.59□□□□□ -0.714e-9■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-210ENST00000528039 764 ntTSL 310.44□□□□□ -0.744e-9■■□□□ 11.6
CSTF2TQ9H0L4 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC10.01□□□□□ -0.814e-9■■□□□ 11.6
CSTF2TQ9H0L4 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.883e-6■■□□□ 11.6
CSTF2TQ9H0L4 PPP4R1L-207ENST00000493688 2325 ntTSL 2 BASIC9.49□□□□□ -0.893e-6■■□□□ 11.6
CSTF2TQ9H0L4 PPP4R1L-202ENST00000334187 2746 ntBASIC9.05□□□□□ -0.963e-6■■□□□ 11.6
CSTF2TQ9H0L4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.67□□□□□ -1.343e-6■■□□□ 11.6
CSTF2TQ9H0L4 PPP4R1L-208ENST00000495058 3593 ntTSL 1 (best)6.5□□□□□ -1.373e-6■■□□□ 11.6
CSTF2TQ9H0L4 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)9.35□□□□□ -0.911e-15■■□□□ 11.6
CSTF2TQ9H0L4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.47■□□□□ 0.232e-7■■□□□ 11.6
CSTF2TQ9H0L4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.182e-7■■□□□ 11.6
CSTF2TQ9H0L4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.22e-7■■□□□ 11.6
CSTF2TQ9H0L4 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC11.57□□□□□ -0.562e-7■■□□□ 11.6
CSTF2TQ9H0L4 RSBN1-203ENST00000476412 3772 ntTSL 29.98□□□□□ -0.812e-7■■□□□ 11.6
CSTF2TQ9H0L4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.112e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.172e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.552e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC2A9-204ENST00000503280 584 ntTSL 47.14□□□□□ -1.272e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC2A9-212ENST00000512342 967 ntTSL 36.98□□□□□ -1.292e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC2A9-205ENST00000503803 644 ntTSL 36.74□□□□□ -1.332e-6■■□□□ 11.6
CSTF2TQ9H0L4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.558e-21■■□□□ 11.6
CSTF2TQ9H0L4 ANP32A-201ENST00000267918 1084 ntTSL 314.01□□□□□ -0.172e-6■■□□□ 11.6
CSTF2TQ9H0L4 ANP32A-209ENST00000495764 504 ntTSL 513.27□□□□□ -0.292e-6■■□□□ 11.6
CSTF2TQ9H0L4 TMEM164-208ENST00000497754 236 ntTSL 220.64■□□□□ 0.892e-6■■□□□ 11.6
CSTF2TQ9H0L4 MAP4-208ENST00000429422 3724 ntTSL 1 (best)10.03□□□□□ -0.81e-8■■□□□ 11.6
CSTF2TQ9H0L4 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.34□□□□□ -0.592e-10■■□□□ 11.6
CSTF2TQ9H0L4 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC11.17□□□□□ -0.622e-10■■□□□ 11.6
CSTF2TQ9H0L4 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.712e-10■■□□□ 11.6
CSTF2TQ9H0L4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.05□□□□□ -1.442e-10■■□□□ 11.6
CSTF2TQ9H0L4 CDC42BPA-209ENST00000448940 7355 ntTSL 1 (best)5.88□□□□□ -1.472e-10■■□□□ 11.6
CSTF2TQ9H0L4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.07□□□□□ -1.62e-10■■□□□ 11.6
CSTF2TQ9H0L4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.325e-7■■□□□ 11.6
CSTF2TQ9H0L4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.325e-7■■□□□ 11.6
CSTF2TQ9H0L4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.454e-7■■□□□ 11.6
CSTF2TQ9H0L4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.74e-8■■□□□ 11.6
CSTF2TQ9H0L4 MPP5-203ENST00000554911 363 ntTSL 325.65■■□□□ 1.74e-8■■□□□ 11.6
CSTF2TQ9H0L4 UBAC1-204ENST00000478485 773 ntTSL 222.39■■□□□ 1.174e-8■■□□□ 11.6
CSTF2TQ9H0L4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.38■■□□□ 1.014e-8■■□□□ 11.6
CSTF2TQ9H0L4 RAD21-209ENST00000523547 908 ntTSL 321.31■■□□□ 14e-8■■□□□ 11.6
CSTF2TQ9H0L4 MPP5-207ENST00000557783 567 ntTSL 418.88■□□□□ 0.614e-8■■□□□ 11.6
CSTF2TQ9H0L4 MPP5-202ENST00000554208 2458 ntTSL 218.76■□□□□ 0.594e-8■■□□□ 11.6
CSTF2TQ9H0L4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.344e-8■■□□□ 11.6
CSTF2TQ9H0L4 RAD21-208ENST00000522699 548 ntTSL 316.22■□□□□ 0.194e-8■■□□□ 11.6
CSTF2TQ9H0L4 NELFA-212ENST00000463820 2495 ntTSL 215.69■□□□□ 0.14e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-215ENST00000528635 538 ntTSL 414.73□□□□□ -0.054e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-217ENST00000529344 603 ntTSL 414.73□□□□□ -0.054e-8■■□□□ 11.6
CSTF2TQ9H0L4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.144e-8■■□□□ 11.6
CSTF2TQ9H0L4 RAD21-202ENST00000517485 874 ntTSL 314.13□□□□□ -0.154e-8■■□□□ 11.6
CSTF2TQ9H0L4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.294e-8■■□□□ 11.6
CSTF2TQ9H0L4 EP400NL-213ENST00000613241 455 ntTSL 312.15□□□□□ -0.464e-8■■□□□ 11.6
CSTF2TQ9H0L4 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC11.19□□□□□ -0.624e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC11.1□□□□□ -0.634e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-220ENST00000530427 560 ntTSL 510.54□□□□□ -0.724e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.734e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC10.1□□□□□ -0.794e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC9.8□□□□□ -0.844e-8■■□□□ 11.6
CSTF2TQ9H0L4 RAD21-206ENST00000519837 515 ntTSL 49.77□□□□□ -0.854e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC9.75□□□□□ -0.854e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC9.66□□□□□ -0.864e-8■■□□□ 11.6
CSTF2TQ9H0L4 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.944e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-219ENST00000529907 826 ntTSL 59.15□□□□□ -0.944e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-224ENST00000533127 551 ntTSL 49.15□□□□□ -0.944e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.01□□□□□ -1.134e-8■■□□□ 11.6
CSTF2TQ9H0L4 RAD21-207ENST00000520992 831 ntTSL 47.51□□□□□ -1.214e-8■■□□□ 11.6
CSTF2TQ9H0L4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.234e-8■■□□□ 11.6
CSTF2TQ9H0L4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.77□□□□□ -1.334e-8■■□□□ 11.6
CSTF2TQ9H0L4 CCNH-209ENST00000511207 451 ntTSL 25.17□□□□□ -1.584e-8■■□□□ 11.6
CSTF2TQ9H0L4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.78□□□□□ -1.84e-8■■□□□ 11.6
CSTF2TQ9H0L4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.074e-8■■□□□ 11.6
CSTF2TQ9H0L4 AC135050.2-202ENST00000532364 499 ntTSL 420.23■□□□□ 0.837e-7■■□□□ 11.5
CSTF2TQ9H0L4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.157e-7■■□□□ 11.5
CSTF2TQ9H0L4 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)14.62□□□□□ -0.077e-7■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-208ENST00000582174 703 ntTSL 318.49■□□□□ 0.553e-8■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-212ENST00000593158 752 ntTSL 517.35■□□□□ 0.373e-8■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.123e-8■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-206ENST00000580805 2679 ntTSL 514.71□□□□□ -0.053e-8■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-204ENST00000577789 2503 ntTSL 514.67□□□□□ -0.063e-8■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.86□□□□□ -0.193e-8■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.313e-8■■□□□ 11.5
CSTF2TQ9H0L4 FLOT2-211ENST00000586827 1069 ntTSL 511.23□□□□□ -0.613e-8■■□□□ 11.5
CSTF2TQ9H0L4 ARL5A-205ENST00000487723 696 ntTSL 320.21■□□□□ 0.835e-7■■□□□ 11.5
CSTF2TQ9H0L4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.45■□□□□ 0.75e-7■■□□□ 11.5
CSTF2TQ9H0L4 ARL5A-204ENST00000458140 1076 ntTSL 519.21■□□□□ 0.675e-7■■□□□ 11.5
CSTF2TQ9H0L4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.395e-7■■□□□ 11.5
CSTF2TQ9H0L4 AC068547.1-203ENST00000637559 1373 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.975e-7■■□□□ 11.5
CSTF2TQ9H0L4 AC068547.1-202ENST00000637224 2827 ntAPPRIS ALT2 TSL 57.1□□□□□ -1.275e-7■■□□□ 11.5
CSTF2TQ9H0L4 ARL5A-203ENST00000446896 1268 ntTSL 26.49□□□□□ -1.375e-7■■□□□ 11.5
CSTF2TQ9H0L4 AC068547.1-201ENST00000636024 1303 ntAPPRIS ALT2 TSL 55.49□□□□□ -1.535e-7■■□□□ 11.5
CSTF2TQ9H0L4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.68■□□□□ 0.263e-8■■□□□ 11.5
CSTF2TQ9H0L4 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.42□□□□□ -0.423e-8■■□□□ 11.5
CSTF2TQ9H0L4 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC11.9□□□□□ -0.53e-8■■□□□ 11.5
CSTF2TQ9H0L4 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.543e-8■■□□□ 11.5
Retrieved 100 of 19,151 protein–RNA pairs in 161.1 ms