RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 DCAF8L2P0C7V8 631 aa10.93□□□□□ -0.66
CDC42BPA-209ENST00000448940 NISCHQ9Y2I1 1504 aa10.62□□□□□ -0.71
CDC42BPA-209ENST00000448940 ABCC9O60706 1549 aa9.78□□□□□ -0.84
CDC42BPA-209ENST00000448940 FAM9AQ8IZU1 332 aaPredicted RBP9.77□□□□□ -0.85
CDC42BPA-209ENST00000448940 SHROOM4Q9ULL8 1493 aa9.56□□□□□ -0.88
CDC42BPA-209ENST00000448940 PABPN1Q86U42 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDC42BPA-209ENST00000448940 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.89
CDC42BPA-209ENST00000448940 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
CDC42BPA-209ENST00000448940 AEBP2Q6ZN18 517 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPA-209ENST00000448940 TTBK1Q5TCY1 1321 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-209ENST00000448940 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPA-209ENST00000448940 TRIM41Q8WV44 630 aa9.19□□□□□ -0.94
CDC42BPA-209ENST00000448940 TRHP20396 242 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-209ENST00000448940 FBLN2P98095 1184 aa9.17□□□□□ -0.94
CDC42BPA-209ENST00000448940 CHIC1Q5VXU3 224 aa9.14□□□□□ -0.95
CDC42BPA-209ENST00000448940 EHMT2Q96KQ7 1210 aa9.14□□□□□ -0.95
CDC42BPA-209ENST00000448940 PLPPR3Q6T4P5 718 aa9.11□□□□□ -0.95
CDC42BPA-209ENST00000448940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-209ENST00000448940 HNRNPUL2Q1KMD3 747 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-209ENST00000448940 RANGAP1P46060 587 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPA-209ENST00000448940 RB1CC1Q8TDY2 1594 aa9.06□□□□□ -0.96
CDC42BPA-209ENST00000448940 APLP2Q06481 763 aa9.01□□□□□ -0.97
CDC42BPA-209ENST00000448940 CCDC180Q9P1Z9 1646 aa8.99□□□□□ -0.97
CDC42BPA-209ENST00000448940 NPM1P06748 294 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDC42BPA-209ENST00000448940 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
CDC42BPA-209ENST00000448940 ESF1Q9H501 851 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-209ENST00000448940 NACADO15069 1562 aa8.9□□□□□ -0.99
CDC42BPA-209ENST00000448940 ERCC6Q03468 1493 aa8.87□□□□□ -0.99
CDC42BPA-209ENST00000448940 BCANQ96GW7 911 aa8.86□□□□□ -0.99
CDC42BPA-209ENST00000448940 UBTFP17480 764 aaKnown RBP8.83□□□□□ -1
CDC42BPA-209ENST00000448940 SCAF1Q9H7N4 1312 aaKnown RBP8.78□□□□□ -1
CDC42BPA-209ENST00000448940 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-209ENST00000448940 CECR2Q9BXF3 1484 aa8.72□□□□□ -1.01
CDC42BPA-209ENST00000448940 ARID4BQ4LE39 1312 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-209ENST00000448940 ZCCHC6Q5VYS8 1495 aaKnown RBP8.69□□□□□ -1.02
CDC42BPA-209ENST00000448940 SENP3Q9H4L4 574 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPA-209ENST00000448940 BAZ1BQ9UIG0 1483 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-209ENST00000448940 PHF23Q9BUL5 403 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-209ENST00000448940 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-209ENST00000448940 STAG3Q9UJ98 1225 aa8.6□□□□□ -1.03
CDC42BPA-209ENST00000448940 PDS5BQ9NTI5 1447 aa8.58□□□□□ -1.04
CDC42BPA-209ENST00000448940 A0A0G2JS52 829 aa8.55□□□□□ -1.04
CDC42BPA-209ENST00000448940 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
CDC42BPA-209ENST00000448940 C14orf37Q86TY3 774 aa8.53□□□□□ -1.04
CDC42BPA-209ENST00000448940 DNAJC5BQ9UF47 199 aa8.53□□□□□ -1.04
CDC42BPA-209ENST00000448940 OSCARQ8IYS5 282 aa8.52□□□□□ -1.05
CDC42BPA-209ENST00000448940 CDK11AQ9UQ88 783 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-209ENST00000448940 ARID3CA6NKF2 412 aa8.5□□□□□ -1.05
CDC42BPA-209ENST00000448940 MYT1Q01538 1121 aa8.49□□□□□ -1.05
CDC42BPA-209ENST00000448940 HAP1P54257 671 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-209ENST00000448940 CYB5RLQ6IPT4 315 aa8.48□□□□□ -1.05
CDC42BPA-209ENST00000448940 DCAF1Q9Y4B6 1507 aa8.47□□□□□ -1.05
CDC42BPA-209ENST00000448940 MYO15BQ96JP2 1530 aa8.46□□□□□ -1.06
CDC42BPA-209ENST00000448940 P3H3Q8IVL6 736 aa8.44□□□□□ -1.06
CDC42BPA-209ENST00000448940 SMARCA2P51531 1590 aa8.43□□□□□ -1.06
CDC42BPA-209ENST00000448940 BAZ1AQ9NRL2 1556 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-209ENST00000448940 PLEKHG5O94827 1062 aa8.42□□□□□ -1.06
CDC42BPA-209ENST00000448940 SLC24A1O60721 1099 aa8.42□□□□□ -1.06
CDC42BPA-209ENST00000448940 KCNH8Q96L42 1107 aa8.4□□□□□ -1.06
CDC42BPA-209ENST00000448940 ZNF777Q9ULD5 760 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-209ENST00000448940 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
CDC42BPA-209ENST00000448940 FOXD1Q16676 465 aa8.38□□□□□ -1.07
CDC42BPA-209ENST00000448940 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-209ENST00000448940 ITGAEP38570 1179 aa8.36□□□□□ -1.07
CDC42BPA-209ENST00000448940 MLECQ14165 292 aa8.36□□□□□ -1.07
CDC42BPA-209ENST00000448940 CSRNP3Q8WYN3 585 aa8.33□□□□□ -1.08
CDC42BPA-209ENST00000448940 PLEKHD1A6NEE1 506 aa8.32□□□□□ -1.08
CDC42BPA-209ENST00000448940 CEP164Q9UPV0 1460 aa8.31□□□□□ -1.08
CDC42BPA-209ENST00000448940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDC42BPA-209ENST00000448940 MEX3CQ5U5Q3 659 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-209ENST00000448940 EIF4G1Q04637 1599 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-209ENST00000448940 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
CDC42BPA-209ENST00000448940 POLR3GLQ9BT43 218 aa8.29□□□□□ -1.08
CDC42BPA-209ENST00000448940 RSF1Q96T23 1441 aaPredicted RBP8.28□□□□□ -1.08
CDC42BPA-209ENST00000448940 FAM50AQ14320 339 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-209ENST00000448940 TDRD9Q8NDG6 1382 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-209ENST00000448940 WRNQ14191 1432 aaPredicted RBP eCLIP8.26□□□□□ -1.09
CDC42BPA-209ENST00000448940 PPP1R15AO75807 674 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-209ENST00000448940 SOGA1O94964 1423 aa8.25□□□□□ -1.09
CDC42BPA-209ENST00000448940 CC2D2AQ9P2K1 1620 aa8.25□□□□□ -1.09
CDC42BPA-209ENST00000448940 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
CDC42BPA-209ENST00000448940 NCAPD3P42695 1498 aa8.24□□□□□ -1.09
CDC42BPA-209ENST00000448940 CARMIL2Q6F5E8 1435 aa8.23□□□□□ -1.09
CDC42BPA-209ENST00000448940 TSPY4P0CV99 314 aa8.23□□□□□ -1.09
CDC42BPA-209ENST00000448940 TSPY10P0CW01 314 aa8.23□□□□□ -1.09
CDC42BPA-209ENST00000448940 TRIM52Q96A61 297 aa8.23□□□□□ -1.09
CDC42BPA-209ENST00000448940 KIF27Q86VH2 1401 aa8.23□□□□□ -1.09
CDC42BPA-209ENST00000448940 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-209ENST00000448940 FANCD2Q9BXW9 1451 aa8.22□□□□□ -1.09
CDC42BPA-209ENST00000448940 LMOD2Q6P5Q4 547 aa8.21□□□□□ -1.09
CDC42BPA-209ENST00000448940 ABCC8Q09428 1581 aa8.2□□□□□ -1.1
CDC42BPA-209ENST00000448940 NPM2Q86SE8 214 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-209ENST00000448940 FAM69CQ0P6D2 419 aa8.18□□□□□ -1.1
CDC42BPA-209ENST00000448940 CUX2O14529 1486 aa8.18□□□□□ -1.1
CDC42BPA-209ENST00000448940 JPH4Q96JJ6 628 aa8.18□□□□□ -1.1
CDC42BPA-209ENST00000448940 PPARGC1BQ86YN6 1023 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-209ENST00000448940 MROH2BQ7Z745 1585 aa8.16□□□□□ -1.1
CDC42BPA-209ENST00000448940 SF3B2Q13435 895 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-209ENST00000448940 NPHP1O15259 732 aa8.14□□□□□ -1.11
CDC42BPA-209ENST00000448940 MRC2Q9UBG0 1479 aa8.13□□□□□ -1.11
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