RNA–Protein interactions for RNA: ENST00000497138.5

PPP4R1L-209, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PPP4R1L, Length 4,680 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-209ENST00000497138 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
PPP4R1L-209ENST00000497138 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
PPP4R1L-209ENST00000497138 AEBP2Q6ZN18 517 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1L-209ENST00000497138 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
PPP4R1L-209ENST00000497138 SUPT5HO00267 1087 aaKnown RBP10.8□□□□□ -0.68
PPP4R1L-209ENST00000497138 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
PPP4R1L-209ENST00000497138 CCDC180Q9P1Z9 1646 aa10.67□□□□□ -0.7
PPP4R1L-209ENST00000497138 ABCC9O60706 1549 aa10.6□□□□□ -0.71
PPP4R1L-209ENST00000497138 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
PPP4R1L-209ENST00000497138 APLP2Q06481 763 aa10.55□□□□□ -0.72
PPP4R1L-209ENST00000497138 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
PPP4R1L-209ENST00000497138 ATP1B4Q9UN42 357 aaPredicted RBP10.45□□□□□ -0.74
PPP4R1L-209ENST00000497138 RANGAP1P46060 587 aaPredicted RBP10.43□□□□□ -0.74
PPP4R1L-209ENST00000497138 MYT1LQ9UL68 1186 aa10.39□□□□□ -0.75
PPP4R1L-209ENST00000497138 MYT1Q01538 1121 aa10.36□□□□□ -0.75
PPP4R1L-209ENST00000497138 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
PPP4R1L-209ENST00000497138 ZCCHC6Q5VYS8 1495 aaKnown RBP10.21□□□□□ -0.77
PPP4R1L-209ENST00000497138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
PPP4R1L-209ENST00000497138 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
PPP4R1L-209ENST00000497138 CHIC1Q5VXU3 224 aa10.18□□□□□ -0.78
PPP4R1L-209ENST00000497138 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
PPP4R1L-209ENST00000497138 NACADO15069 1562 aa10.11□□□□□ -0.79
PPP4R1L-209ENST00000497138 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
PPP4R1L-209ENST00000497138 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
PPP4R1L-209ENST00000497138 DCAF1Q9Y4B6 1507 aa10.04□□□□□ -0.8
PPP4R1L-209ENST00000497138 MYO15BQ96JP2 1530 aa9.99□□□□□ -0.81
PPP4R1L-209ENST00000497138 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
PPP4R1L-209ENST00000497138 TRIM41Q8WV44 630 aa9.95□□□□□ -0.82
PPP4R1L-209ENST00000497138 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
PPP4R1L-209ENST00000497138 FBLN2P98095 1184 aa9.92□□□□□ -0.82
PPP4R1L-209ENST00000497138 CENPBP07199 599 aaPredicted RBP9.91□□□□□ -0.82
PPP4R1L-209ENST00000497138 SLC4A1APQ9BWU0 796 aaKnown RBP9.88□□□□□ -0.83
PPP4R1L-209ENST00000497138 POLR3GLQ9BT43 218 aa9.83□□□□□ -0.84
PPP4R1L-209ENST00000497138 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
PPP4R1L-209ENST00000497138 HRCP23327 699 aa9.81□□□□□ -0.84
PPP4R1L-209ENST00000497138 ZEB1P37275 1124 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1L-209ENST00000497138 BCANQ96GW7 911 aa9.79□□□□□ -0.84
PPP4R1L-209ENST00000497138 ITGAEP38570 1179 aa9.79□□□□□ -0.84
PPP4R1L-209ENST00000497138 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
PPP4R1L-209ENST00000497138 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
PPP4R1L-209ENST00000497138 CNGB1Q14028 1251 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1L-209ENST00000497138 UNC13AQ9UPW8 1703 aa9.69□□□□□ -0.86
PPP4R1L-209ENST00000497138 CCER1Q8TC90 406 aaPredicted RBP9.67□□□□□ -0.86
PPP4R1L-209ENST00000497138 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
PPP4R1L-209ENST00000497138 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
PPP4R1L-209ENST00000497138 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
PPP4R1L-209ENST00000497138 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
PPP4R1L-209ENST00000497138 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
PPP4R1L-209ENST00000497138 YTHDC1Q96MU7 727 aaKnown RBP9.55□□□□□ -0.88
PPP4R1L-209ENST00000497138 ARID3CA6NKF2 412 aa9.55□□□□□ -0.88
PPP4R1L-209ENST00000497138 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
PPP4R1L-209ENST00000497138 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
PPP4R1L-209ENST00000497138 NEFLP07196 543 aa9.52□□□□□ -0.89
PPP4R1L-209ENST00000497138 A0A0G2JS52 829 aa9.51□□□□□ -0.89
PPP4R1L-209ENST00000497138 DNAJC5BQ9UF47 199 aa9.5□□□□□ -0.89
PPP4R1L-209ENST00000497138 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
PPP4R1L-209ENST00000497138 TRIM52Q96A61 297 aa9.5□□□□□ -0.89
PPP4R1L-209ENST00000497138 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1L-209ENST00000497138 MROH2BQ7Z745 1585 aa9.49□□□□□ -0.89
PPP4R1L-209ENST00000497138 SCAF1Q9H7N4 1312 aaKnown RBP9.48□□□□□ -0.89
PPP4R1L-209ENST00000497138 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1L-209ENST00000497138 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
PPP4R1L-209ENST00000497138 ZNF326Q5BKZ1 582 aaKnown RBP9.45□□□□□ -0.9
PPP4R1L-209ENST00000497138 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
PPP4R1L-209ENST00000497138 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1L-209ENST00000497138 CHGAP10645 457 aaKnown RBP9.44□□□□□ -0.9
PPP4R1L-209ENST00000497138 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
PPP4R1L-209ENST00000497138 ZNF777Q9ULD5 760 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1L-209ENST00000497138 CC2D2AQ9P2K1 1620 aa9.42□□□□□ -0.9
PPP4R1L-209ENST00000497138 ATAD2BQ9ULI0 1458 aa9.42□□□□□ -0.9
PPP4R1L-209ENST00000497138 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
PPP4R1L-209ENST00000497138 BCL11AQ9H165 835 aa9.39□□□□□ -0.91
PPP4R1L-209ENST00000497138 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
PPP4R1L-209ENST00000497138 DAXXQ9UER7 740 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1L-209ENST00000497138 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
PPP4R1L-209ENST00000497138 NEFMP07197 916 aa9.38□□□□□ -0.91
PPP4R1L-209ENST00000497138 WIZO95785 1651 aa9.38□□□□□ -0.91
PPP4R1L-209ENST00000497138 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
PPP4R1L-209ENST00000497138 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
PPP4R1L-209ENST00000497138 ARID4BQ4LE39 1312 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1L-209ENST00000497138 CLSPNQ9HAW4 1339 aa9.35□□□□□ -0.91
PPP4R1L-209ENST00000497138 NCAPD3P42695 1498 aa9.35□□□□□ -0.91
PPP4R1L-209ENST00000497138 ZBTB47Q9UFB7 747 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1L-209ENST00000497138 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
PPP4R1L-209ENST00000497138 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1L-209ENST00000497138 SENP3Q9H4L4 574 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1L-209ENST00000497138 NPM2Q86SE8 214 aaKnown RBP9.31□□□□□ -0.92
PPP4R1L-209ENST00000497138 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
PPP4R1L-209ENST00000497138 CHMP7Q8WUX9 453 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1L-209ENST00000497138 PHF23Q9BUL5 403 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1L-209ENST00000497138 DIEXFQ68CQ4 756 aaKnown RBP9.27□□□□□ -0.93
PPP4R1L-209ENST00000497138 TOP2AP11388 1531 aaKnown RBP9.27□□□□□ -0.93
PPP4R1L-209ENST00000497138 ZBTB7CA1YPR0 619 aa9.26□□□□□ -0.93
PPP4R1L-209ENST00000497138 HMGXB3Q12766 1538 aa9.25□□□□□ -0.93
PPP4R1L-209ENST00000497138 NEUROD1Q13562 356 aa9.24□□□□□ -0.93
PPP4R1L-209ENST00000497138 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
PPP4R1L-209ENST00000497138 PEG3Q9GZU2 1588 aa9.24□□□□□ -0.93
PPP4R1L-209ENST00000497138 PPP1R15AO75807 674 aaPredicted RBP9.23□□□□□ -0.93
PPP4R1L-209ENST00000497138 KCNH8Q96L42 1107 aa9.21□□□□□ -0.94
PPP4R1L-209ENST00000497138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms