RNA–Protein interactions for RNA: ENST00000497754.1

TMEM164-208, Transcript of transmembrane protein 164, humanhuman

TSL 2

Gene TMEM164, Length 236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM164-208ENST00000497754 NISCHQ9Y2I1 1504 aa54.67■■■■■ 6.34
TMEM164-208ENST00000497754 CCDC180Q9P1Z9 1646 aa49.01■■■■■ 5.44
TMEM164-208ENST00000497754 ABCC9O60706 1549 aa48.62■■■■■ 5.37
TMEM164-208ENST00000497754 RB1CC1Q8TDY2 1594 aa46.46■■■■■ 5.03
TMEM164-208ENST00000497754 NACADO15069 1562 aa46.22■■■■■ 4.99
TMEM164-208ENST00000497754 DCAF8L2P0C7V8 631 aa45.85■■■■■ 4.93
TMEM164-208ENST00000497754 MYO15BQ96JP2 1530 aa45.71■■■■■ 4.91
TMEM164-208ENST00000497754 UNC13AQ9UPW8 1703 aa45.52■■■■■ 4.88
TMEM164-208ENST00000497754 ZCCHC6Q5VYS8 1495 aaKnown RBP45.38■■■■■ 4.86
TMEM164-208ENST00000497754 DNAJC5BQ9UF47 199 aa45.35■■■■■ 4.85
TMEM164-208ENST00000497754 PABPN1Q86U42 306 aaKnown RBP eCLIP45.26■■■■■ 4.84
TMEM164-208ENST00000497754 DCAF1Q9Y4B6 1507 aa45.21■■■■■ 4.83
TMEM164-208ENST00000497754 BICRAQ9NZM4 1560 aa45.13■■■■■ 4.82
TMEM164-208ENST00000497754 SCRIBQ14160 1630 aa44.61■■■■■ 4.73
TMEM164-208ENST00000497754 SHROOM4Q9ULL8 1493 aa44.54■■■■■ 4.72
TMEM164-208ENST00000497754 CC2D2AQ9P2K1 1620 aa43.99■■■■■ 4.63
TMEM164-208ENST00000497754 EIF4G1Q04637 1599 aaKnown RBP43.97■■■■■ 4.63
TMEM164-208ENST00000497754 CECR2Q9BXF3 1484 aa43.77■■■■■ 4.6
TMEM164-208ENST00000497754 NCAPD3P42695 1498 aa42.64■■■■■ 4.42
TMEM164-208ENST00000497754 SMARCA4P51532 1647 aa42.62■■■■■ 4.41
TMEM164-208ENST00000497754 ATAD2BQ9ULI0 1458 aa42.55■■■■■ 4.4
TMEM164-208ENST00000497754 SMARCA2P51531 1590 aa42.45■■■■■ 4.39
TMEM164-208ENST00000497754 BAZ1AQ9NRL2 1556 aaPredicted RBP42.42■■■■■ 4.38
TMEM164-208ENST00000497754 HMGXB3Q12766 1538 aa42.39■■■■■ 4.38
TMEM164-208ENST00000497754 PEG3Q9GZU2 1588 aa42.23■■■■■ 4.35
TMEM164-208ENST00000497754 BAZ1BQ9UIG0 1483 aaKnown RBP42.13■■■■■ 4.34
TMEM164-208ENST00000497754 MROH2BQ7Z745 1585 aa42.12■■■■■ 4.33
TMEM164-208ENST00000497754 ERCC6Q03468 1493 aa41.93■■■■■ 4.3
TMEM164-208ENST00000497754 NESP48681 1621 aa41.87■■■■■ 4.29
TMEM164-208ENST00000497754 CUX2O14529 1486 aa41.83■■■■■ 4.29
TMEM164-208ENST00000497754 LAMC3Q9Y6N6 1575 aa41.67■■■■■ 4.26
TMEM164-208ENST00000497754 WIZO95785 1651 aa41.66■■■■■ 4.26
TMEM164-208ENST00000497754 THOC2Q8NI27 1593 aaKnown RBP41.46■■■■■ 4.23
TMEM164-208ENST00000497754 DNAJC5Q9H3Z4 198 aa41.43■■■■■ 4.22
TMEM164-208ENST00000497754 KIF21AQ7Z4S6 1674 aa41.42■■■■■ 4.22
TMEM164-208ENST00000497754 PDS5BQ9NTI5 1447 aa41.35■■■■■ 4.21
TMEM164-208ENST00000497754 CADPSQ9ULU8 1353 aa41.33■■■■■ 4.21
TMEM164-208ENST00000497754 RSF1Q96T23 1441 aaPredicted RBP41.33■■■■■ 4.21
TMEM164-208ENST00000497754 TOP2AP11388 1531 aaKnown RBP41.14■■■■■ 4.18
TMEM164-208ENST00000497754 MRC2Q9UBG0 1479 aa41.01■■■■■ 4.16
TMEM164-208ENST00000497754 CFTRP13569 1480 aa40.95■■■■■ 4.15
TMEM164-208ENST00000497754 WDR62O43379 1518 aa40.93■■■■■ 4.14
TMEM164-208ENST00000497754 CEP164Q9UPV0 1460 aa40.89■■■■■ 4.14
TMEM164-208ENST00000497754 FANCD2Q9BXW9 1451 aa40.87■■■■■ 4.13
TMEM164-208ENST00000497754 PRDM2Q13029 1718 aa40.69■■■■■ 4.1
TMEM164-208ENST00000497754 CCDC88BA6NC98 1476 aa40.64■■■■■ 4.1
TMEM164-208ENST00000497754 URB2Q14146 1524 aaKnown RBP40.54■■■■■ 4.08
TMEM164-208ENST00000497754 TOPBP1Q92547 1522 aa40.15■■■■■ 4.02
TMEM164-208ENST00000497754 ABCC8Q09428 1581 aa40.07■■■■■ 4.01
TMEM164-208ENST00000497754 IFT140Q96RY7 1462 aa40.07■■■■■ 4
TMEM164-208ENST00000497754 DNMBPQ6XZF7 1577 aa40.04■■■■■ 4
TMEM164-208ENST00000497754 ZNF608Q9ULD9 1512 aaPredicted RBP39.97■■■■□ 3.99
TMEM164-208ENST00000497754 OSCARQ8IYS5 282 aa39.89■■■■□ 3.98
TMEM164-208ENST00000497754 EIF4G3O43432 1585 aaKnown RBP39.81■■■■□ 3.96
TMEM164-208ENST00000497754 TARBP1Q13395 1621 aaKnown RBP39.81■■■■□ 3.96
TMEM164-208ENST00000497754 POLA1P09884 1462 aaPredicted RBP39.75■■■■□ 3.95
TMEM164-208ENST00000497754 TRIM41Q8WV44 630 aa39.66■■■■□ 3.94
TMEM164-208ENST00000497754 AQRO60306 1485 aaKnown RBP eCLIP39.62■■■■□ 3.93
TMEM164-208ENST00000497754 SUPT5HO00267 1087 aaKnown RBP39.59■■■■□ 3.93
TMEM164-208ENST00000497754 RAD54L2Q9Y4B4 1467 aa39.57■■■■□ 3.93
TMEM164-208ENST00000497754 CUX1P39880 1505 aa39.56■■■■□ 3.92
TMEM164-208ENST00000497754 SOGA1O94964 1423 aa39.54■■■■□ 3.92
TMEM164-208ENST00000497754 FGD5Q6ZNL6 1462 aa39.54■■■■□ 3.92
TMEM164-208ENST00000497754 CHD1O14646 1710 aa39.5■■■■□ 3.91
TMEM164-208ENST00000497754 WDR97A6NE52 1622 aa39.44■■■■□ 3.9
TMEM164-208ENST00000497754 RIMBP3CA6NJZ7 1639 aa39.43■■■■□ 3.9
TMEM164-208ENST00000497754 RIMBP3BA6NNM3 1639 aa39.43■■■■□ 3.9
TMEM164-208ENST00000497754 RIMBP3Q9UFD9 1639 aa39.43■■■■□ 3.9
TMEM164-208ENST00000497754 TDRD9Q8NDG6 1382 aaKnown RBP39.4■■■■□ 3.9
TMEM164-208ENST00000497754 ARHGEF11O15085 1522 aa39.31■■■■□ 3.88
TMEM164-208ENST00000497754 SNAPC4Q5SXM2 1469 aa39.25■■■■□ 3.87
TMEM164-208ENST00000497754 FBLN2P98095 1184 aa39.22■■■■□ 3.87
TMEM164-208ENST00000497754 GRIN2BQ13224 1484 aa39.18■■■■□ 3.86
TMEM164-208ENST00000497754 MAGI1Q96QZ7 1491 aaPredicted RBP39.17■■■■□ 3.86
TMEM164-208ENST00000497754 PBRM1Q86U86 1689 aa39.14■■■■□ 3.86
TMEM164-208ENST00000497754 ABCA10Q8WWZ4 1543 aa39.12■■■■□ 3.85
TMEM164-208ENST00000497754 ABCA5Q8WWZ7 1642 aa39.08■■■■□ 3.85
TMEM164-208ENST00000497754 GAPVD1Q14C86 1478 aa39.08■■■■□ 3.85
TMEM164-208ENST00000497754 BIVM-ERCC5R4GMW8 1640 aa39.06■■■■□ 3.84
TMEM164-208ENST00000497754 SYNJ2O15056 1496 aa39.03■■■■□ 3.84
TMEM164-208ENST00000497754 CLASP1Q7Z460 1538 aa39.03■■■■□ 3.84
TMEM164-208ENST00000497754 TOP2BQ02880 1626 aa39.03■■■■□ 3.84
TMEM164-208ENST00000497754 CHMP7Q8WUX9 453 aaPredicted RBP39.01■■■■□ 3.84
TMEM164-208ENST00000497754 SYNJ1O43426 1573 aa39■■■■□ 3.83
TMEM164-208ENST00000497754 WRNQ14191 1432 aaPredicted RBP eCLIP38.97■■■■□ 3.838e-8■■■■■ 37.6
TMEM164-208ENST00000497754 ARAP1Q96P48 1450 aa38.95■■■■□ 3.83
TMEM164-208ENST00000497754 CYB5RLQ6IPT4 315 aa38.91■■■■□ 3.82
TMEM164-208ENST00000497754 ADAMTS12P58397 1594 aa38.75■■■■□ 3.79
TMEM164-208ENST00000497754 GRIN2AQ12879 1464 aa38.69■■■■□ 3.78
TMEM164-208ENST00000497754 ERICH3Q5RHP9 1530 aa38.64■■■■□ 3.78
TMEM164-208ENST00000497754 FHAD1B1AJZ9 1412 aa38.6■■■■□ 3.77
TMEM164-208ENST00000497754 CEP170Q5SW79 1584 aa38.57■■■■□ 3.77
TMEM164-208ENST00000497754 NUP160Q12769 1436 aa38.56■■■■□ 3.76
TMEM164-208ENST00000497754 ERCC6L2Q5T890 1561 aa38.42■■■■□ 3.74
TMEM164-208ENST00000497754 SHROOM2Q13796 1616 aa38.41■■■■□ 3.74
TMEM164-208ENST00000497754 TRHP20396 242 aaPredicted RBP38.36■■■■□ 3.73
TMEM164-208ENST00000497754 KIF27Q86VH2 1401 aa38.21■■■■□ 3.71
TMEM164-208ENST00000497754 RUSC2Q8N2Y8 1516 aa38.2■■■■□ 3.71
TMEM164-208ENST00000497754 CUL7Q14999 1698 aa38.17■■■■□ 3.7
TMEM164-208ENST00000497754 IGF1RP08069 1367 aa38.16■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms