RNA–Protein interactions for RNA: ENST00000334187.12

PPP4R1L-202, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

BASIC

Gene PPP4R1L, Length 2,746 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-202ENST00000334187 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
PPP4R1L-202ENST00000334187 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
PPP4R1L-202ENST00000334187 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
PPP4R1L-202ENST00000334187 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
PPP4R1L-202ENST00000334187 HRCP23327 699 aa15.92■□□□□ 0.14
PPP4R1L-202ENST00000334187 SHROOM4Q9ULL8 1493 aa15.89■□□□□ 0.13
PPP4R1L-202ENST00000334187 ABCC9O60706 1549 aa15.89■□□□□ 0.13
PPP4R1L-202ENST00000334187 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
PPP4R1L-202ENST00000334187 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
PPP4R1L-202ENST00000334187 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
PPP4R1L-202ENST00000334187 NACADO15069 1562 aa15.7■□□□□ 0.1
PPP4R1L-202ENST00000334187 CHIC1Q5VXU3 224 aa15.66■□□□□ 0.1
PPP4R1L-202ENST00000334187 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
PPP4R1L-202ENST00000334187 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
PPP4R1L-202ENST00000334187 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
PPP4R1L-202ENST00000334187 PPARGC1BQ86YN6 1023 aaKnown RBP15.38■□□□□ 0.05
PPP4R1L-202ENST00000334187 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
PPP4R1L-202ENST00000334187 TRIM26Q12899 539 aaPredicted RBP15.21■□□□□ 0.03
PPP4R1L-202ENST00000334187 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.02
PPP4R1L-202ENST00000334187 ZEB1P37275 1124 aaPredicted RBP15.11■□□□□ 0.01
PPP4R1L-202ENST00000334187 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
PPP4R1L-202ENST00000334187 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
PPP4R1L-202ENST00000334187 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
PPP4R1L-202ENST00000334187 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
PPP4R1L-202ENST00000334187 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
PPP4R1L-202ENST00000334187 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
PPP4R1L-202ENST00000334187 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
PPP4R1L-202ENST00000334187 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
PPP4R1L-202ENST00000334187 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
PPP4R1L-202ENST00000334187 WIZO95785 1651 aa14.77□□□□□ -0.05
PPP4R1L-202ENST00000334187 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
PPP4R1L-202ENST00000334187 PEG3Q9GZU2 1588 aa14.69□□□□□ -0.06
PPP4R1L-202ENST00000334187 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
PPP4R1L-202ENST00000334187 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
PPP4R1L-202ENST00000334187 ACIN1Q9UKV3 1341 aaKnown RBP14.63□□□□□ -0.07
PPP4R1L-202ENST00000334187 MYT1Q01538 1121 aa14.61□□□□□ -0.07
PPP4R1L-202ENST00000334187 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
PPP4R1L-202ENST00000334187 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.08
PPP4R1L-202ENST00000334187 NEUROD1Q13562 356 aa14.52□□□□□ -0.09
PPP4R1L-202ENST00000334187 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
PPP4R1L-202ENST00000334187 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
PPP4R1L-202ENST00000334187 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
PPP4R1L-202ENST00000334187 HMGXB3Q12766 1538 aa14.48□□□□□ -0.09
PPP4R1L-202ENST00000334187 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
PPP4R1L-202ENST00000334187 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
PPP4R1L-202ENST00000334187 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
PPP4R1L-202ENST00000334187 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
PPP4R1L-202ENST00000334187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
PPP4R1L-202ENST00000334187 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
PPP4R1L-202ENST00000334187 CCER1Q8TC90 406 aaPredicted RBP14.41□□□□□ -0.1
PPP4R1L-202ENST00000334187 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
PPP4R1L-202ENST00000334187 CEP162Q5TB80 1403 aa14.27□□□□□ -0.13
PPP4R1L-202ENST00000334187 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
PPP4R1L-202ENST00000334187 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
PPP4R1L-202ENST00000334187 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
PPP4R1L-202ENST00000334187 EEA1Q15075 1411 aa14.22□□□□□ -0.13
PPP4R1L-202ENST00000334187 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
PPP4R1L-202ENST00000334187 CFTRP13569 1480 aa14.14□□□□□ -0.15
PPP4R1L-202ENST00000334187 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
PPP4R1L-202ENST00000334187 GOLGA3Q08378 1498 aa14.1□□□□□ -0.15
PPP4R1L-202ENST00000334187 SOGA1O94964 1423 aa14.1□□□□□ -0.15
PPP4R1L-202ENST00000334187 KIF21BO75037 1637 aa14.08□□□□□ -0.16
PPP4R1L-202ENST00000334187 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
PPP4R1L-202ENST00000334187 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
PPP4R1L-202ENST00000334187 MIER1Q8N108 512 aa14.03□□□□□ -0.16
PPP4R1L-202ENST00000334187 RUSC2Q8N2Y8 1516 aa14.02□□□□□ -0.17
PPP4R1L-202ENST00000334187 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
PPP4R1L-202ENST00000334187 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
PPP4R1L-202ENST00000334187 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
PPP4R1L-202ENST00000334187 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
PPP4R1L-202ENST00000334187 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
PPP4R1L-202ENST00000334187 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
PPP4R1L-202ENST00000334187 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
PPP4R1L-202ENST00000334187 YTHDC1Q96MU7 727 aaKnown RBP13.97□□□□□ -0.17
PPP4R1L-202ENST00000334187 NESP48681 1621 aa13.95□□□□□ -0.18
PPP4R1L-202ENST00000334187 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
PPP4R1L-202ENST00000334187 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
PPP4R1L-202ENST00000334187 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
PPP4R1L-202ENST00000334187 CUX1P39880 1505 aa13.93□□□□□ -0.18
PPP4R1L-202ENST00000334187 UBTFP17480 764 aaKnown RBP13.9□□□□□ -0.18
PPP4R1L-202ENST00000334187 CLIP1P30622 1438 aa13.9□□□□□ -0.18
PPP4R1L-202ENST00000334187 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
PPP4R1L-202ENST00000334187 KIF21AQ7Z4S6 1674 aa13.83□□□□□ -0.2
PPP4R1L-202ENST00000334187 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
PPP4R1L-202ENST00000334187 SUPT16HQ9Y5B9 1047 aaKnown RBP13.83□□□□□ -0.2
PPP4R1L-202ENST00000334187 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
PPP4R1L-202ENST00000334187 DHX57Q6P158 1386 aaKnown RBP13.81□□□□□ -0.2
PPP4R1L-202ENST00000334187 CUX2O14529 1486 aa13.79□□□□□ -0.2
PPP4R1L-202ENST00000334187 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
PPP4R1L-202ENST00000334187 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.2
PPP4R1L-202ENST00000334187 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.21
PPP4R1L-202ENST00000334187 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
PPP4R1L-202ENST00000334187 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
PPP4R1L-202ENST00000334187 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
PPP4R1L-202ENST00000334187 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
PPP4R1L-202ENST00000334187 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1L-202ENST00000334187 APLP2Q06481 763 aa13.7□□□□□ -0.22
PPP4R1L-202ENST00000334187 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
PPP4R1L-202ENST00000334187 KIF27Q86VH2 1401 aa13.7□□□□□ -0.22
PPP4R1L-202ENST00000334187 ANP32EQ9BTT0 268 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms