RNA–Protein interactions for RNA: ENST00000495058.5

PPP4R1L-208, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best)

Gene PPP4R1L, Length 3,593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-208ENST00000495058 NISCHQ9Y2I1 1504 aa15.38■□□□□ 0.05
PPP4R1L-208ENST00000495058 CCDC180Q9P1Z9 1646 aa13.43□□□□□ -0.26
PPP4R1L-208ENST00000495058 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
PPP4R1L-208ENST00000495058 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.31
PPP4R1L-208ENST00000495058 ABCC9O60706 1549 aa13.11□□□□□ -0.31
PPP4R1L-208ENST00000495058 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
PPP4R1L-208ENST00000495058 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
PPP4R1L-208ENST00000495058 DCAF1Q9Y4B6 1507 aa12.64□□□□□ -0.39
PPP4R1L-208ENST00000495058 NACADO15069 1562 aa12.63□□□□□ -0.39
PPP4R1L-208ENST00000495058 RB1CC1Q8TDY2 1594 aa12.61□□□□□ -0.39
PPP4R1L-208ENST00000495058 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
PPP4R1L-208ENST00000495058 SCRIBQ14160 1630 aa12.46□□□□□ -0.41
PPP4R1L-208ENST00000495058 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
PPP4R1L-208ENST00000495058 UNC13AQ9UPW8 1703 aa12.19□□□□□ -0.46
PPP4R1L-208ENST00000495058 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
PPP4R1L-208ENST00000495058 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
PPP4R1L-208ENST00000495058 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
PPP4R1L-208ENST00000495058 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
PPP4R1L-208ENST00000495058 FAM9AQ8IZU1 332 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1L-208ENST00000495058 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
PPP4R1L-208ENST00000495058 BAZ1AQ9NRL2 1556 aaPredicted RBP11.91□□□□□ -0.5
PPP4R1L-208ENST00000495058 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
PPP4R1L-208ENST00000495058 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
PPP4R1L-208ENST00000495058 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1L-208ENST00000495058 EIF4G1Q04637 1599 aaKnown RBP11.87□□□□□ -0.51
PPP4R1L-208ENST00000495058 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
PPP4R1L-208ENST00000495058 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
PPP4R1L-208ENST00000495058 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
PPP4R1L-208ENST00000495058 WIZO95785 1651 aa11.77□□□□□ -0.53
PPP4R1L-208ENST00000495058 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
PPP4R1L-208ENST00000495058 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
PPP4R1L-208ENST00000495058 SMARCA2P51531 1590 aa11.74□□□□□ -0.53
PPP4R1L-208ENST00000495058 BAZ1BQ9UIG0 1483 aaKnown RBP11.73□□□□□ -0.53
PPP4R1L-208ENST00000495058 DNAJC5BQ9UF47 199 aa11.73□□□□□ -0.53
PPP4R1L-208ENST00000495058 MYT1Q01538 1121 aa11.71□□□□□ -0.54
PPP4R1L-208ENST00000495058 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
PPP4R1L-208ENST00000495058 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1L-208ENST00000495058 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
PPP4R1L-208ENST00000495058 PEG3Q9GZU2 1588 aa11.65□□□□□ -0.55
PPP4R1L-208ENST00000495058 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
PPP4R1L-208ENST00000495058 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
PPP4R1L-208ENST00000495058 HRCP23327 699 aa11.57□□□□□ -0.56
PPP4R1L-208ENST00000495058 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
PPP4R1L-208ENST00000495058 RANGAP1P46060 587 aaPredicted RBP11.53□□□□□ -0.56
PPP4R1L-208ENST00000495058 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.58
PPP4R1L-208ENST00000495058 TRIM26Q12899 539 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1L-208ENST00000495058 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
PPP4R1L-208ENST00000495058 NESP48681 1621 aa11.39□□□□□ -0.59
PPP4R1L-208ENST00000495058 CFTRP13569 1480 aa11.35□□□□□ -0.59
PPP4R1L-208ENST00000495058 ABCC8Q09428 1581 aa11.32□□□□□ -0.6
PPP4R1L-208ENST00000495058 PDS5BQ9NTI5 1447 aa11.32□□□□□ -0.6
PPP4R1L-208ENST00000495058 ERCC6Q03468 1493 aa11.31□□□□□ -0.6
PPP4R1L-208ENST00000495058 LAMC3Q9Y6N6 1575 aa11.3□□□□□ -0.6
PPP4R1L-208ENST00000495058 FANCD2Q9BXW9 1451 aa11.3□□□□□ -0.6
PPP4R1L-208ENST00000495058 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
PPP4R1L-208ENST00000495058 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
PPP4R1L-208ENST00000495058 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
PPP4R1L-208ENST00000495058 SOGA1O94964 1423 aa11.23□□□□□ -0.61
PPP4R1L-208ENST00000495058 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
PPP4R1L-208ENST00000495058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1L-208ENST00000495058 CCER1Q8TC90 406 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1L-208ENST00000495058 APLP2Q06481 763 aa11.21□□□□□ -0.62
PPP4R1L-208ENST00000495058 KIF21AQ7Z4S6 1674 aa11.16□□□□□ -0.62
PPP4R1L-208ENST00000495058 PRDM2Q13029 1718 aa11.15□□□□□ -0.62
PPP4R1L-208ENST00000495058 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.62
PPP4R1L-208ENST00000495058 RUSC2Q8N2Y8 1516 aa11.15□□□□□ -0.63
PPP4R1L-208ENST00000495058 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
PPP4R1L-208ENST00000495058 CUX1P39880 1505 aa11.13□□□□□ -0.63
PPP4R1L-208ENST00000495058 SYNJ1O43426 1573 aa11.12□□□□□ -0.63
PPP4R1L-208ENST00000495058 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
PPP4R1L-208ENST00000495058 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
PPP4R1L-208ENST00000495058 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
PPP4R1L-208ENST00000495058 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
PPP4R1L-208ENST00000495058 DNMBPQ6XZF7 1577 aa11.1□□□□□ -0.63
PPP4R1L-208ENST00000495058 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
PPP4R1L-208ENST00000495058 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
PPP4R1L-208ENST00000495058 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1L-208ENST00000495058 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
PPP4R1L-208ENST00000495058 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1L-208ENST00000495058 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
PPP4R1L-208ENST00000495058 ITGAEP38570 1179 aa11.03□□□□□ -0.64
PPP4R1L-208ENST00000495058 BIVM-ERCC5R4GMW8 1640 aa11.03□□□□□ -0.64
PPP4R1L-208ENST00000495058 CUX2O14529 1486 aa11.03□□□□□ -0.64
PPP4R1L-208ENST00000495058 WDR62O43379 1518 aa11.03□□□□□ -0.64
PPP4R1L-208ENST00000495058 THOC2Q8NI27 1593 aaKnown RBP11.02□□□□□ -0.64
PPP4R1L-208ENST00000495058 TDRD9Q8NDG6 1382 aaKnown RBP11.01□□□□□ -0.65
PPP4R1L-208ENST00000495058 GOLGA3Q08378 1498 aa10.99□□□□□ -0.65
PPP4R1L-208ENST00000495058 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
PPP4R1L-208ENST00000495058 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
PPP4R1L-208ENST00000495058 P3H3Q8IVL6 736 aa10.98□□□□□ -0.65
PPP4R1L-208ENST00000495058 IFT140Q96RY7 1462 aa10.97□□□□□ -0.65
PPP4R1L-208ENST00000495058 CLIP1P30622 1438 aa10.97□□□□□ -0.65
PPP4R1L-208ENST00000495058 EEA1Q15075 1411 aa10.97□□□□□ -0.65
PPP4R1L-208ENST00000495058 ERICH6Q7L0X2 663 aa10.95□□□□□ -0.66
PPP4R1L-208ENST00000495058 AQRO60306 1485 aaKnown RBP eCLIP10.94□□□□□ -0.66
PPP4R1L-208ENST00000495058 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
PPP4R1L-208ENST00000495058 ZNF608Q9ULD9 1512 aaPredicted RBP10.93□□□□□ -0.66
PPP4R1L-208ENST00000495058 FBLN2P98095 1184 aa10.93□□□□□ -0.66
PPP4R1L-208ENST00000495058 RAPGEF2Q9Y4G8 1499 aa10.92□□□□□ -0.66
PPP4R1L-208ENST00000495058 GAPVD1Q14C86 1478 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms