RNA–Protein interactions for RNA: ENST00000523547.1

RAD21-209, Transcript of RAD21 cohesin complex component, humanhuman

TSL 3

Gene RAD21, Length 908 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD21-209ENST00000523547 NISCHQ9Y2I1 1504 aa55.87■■■■■ 6.53
RAD21-209ENST00000523547 CCDC180Q9P1Z9 1646 aa49.88■■■■■ 5.58
RAD21-209ENST00000523547 ABCC9O60706 1549 aa49.39■■■■■ 5.5
RAD21-209ENST00000523547 RB1CC1Q8TDY2 1594 aa47.25■■■■■ 5.15
RAD21-209ENST00000523547 NACADO15069 1562 aa47.07■■■■■ 5.12
RAD21-209ENST00000523547 DCAF8L2P0C7V8 631 aa46.97■■■■■ 5.11
RAD21-209ENST00000523547 MYO15BQ96JP2 1530 aa46.59■■■■■ 5.05
RAD21-209ENST00000523547 ZCCHC6Q5VYS8 1495 aaKnown RBP46.4■■■■■ 5.02
RAD21-209ENST00000523547 DCAF1Q9Y4B6 1507 aa46.19■■■■■ 4.99
RAD21-209ENST00000523547 UNC13AQ9UPW8 1703 aa46.14■■■■■ 4.98
RAD21-209ENST00000523547 PABPN1Q86U42 306 aaKnown RBP eCLIP46.09■■■■■ 4.97
RAD21-209ENST00000523547 DNAJC5BQ9UF47 199 aa45.88■■■■■ 4.94
RAD21-209ENST00000523547 BICRAQ9NZM4 1560 aa45.83■■■■■ 4.93
RAD21-209ENST00000523547 SCRIBQ14160 1630 aa45.48■■■■■ 4.87
RAD21-209ENST00000523547 SHROOM4Q9ULL8 1493 aa45.3■■■■■ 4.84
RAD21-209ENST00000523547 EIF4G1Q04637 1599 aaKnown RBP44.67■■■■■ 4.74
RAD21-209ENST00000523547 CC2D2AQ9P2K1 1620 aa44.64■■■■■ 4.74
RAD21-209ENST00000523547 CECR2Q9BXF3 1484 aa44.45■■■■■ 4.71
RAD21-209ENST00000523547 NCAPD3P42695 1498 aa43.45■■■■■ 4.55
RAD21-209ENST00000523547 SMARCA4P51532 1647 aa43.45■■■■■ 4.55
RAD21-209ENST00000523547 ATAD2BQ9ULI0 1458 aa43.38■■■■■ 4.54
RAD21-209ENST00000523547 BAZ1AQ9NRL2 1556 aaPredicted RBP43.33■■■■■ 4.53
RAD21-209ENST00000523547 SMARCA2P51531 1590 aa43.29■■■■■ 4.52
RAD21-209ENST00000523547 HMGXB3Q12766 1538 aa43.16■■■■■ 4.5
RAD21-209ENST00000523547 MROH2BQ7Z745 1585 aa43.04■■■■■ 4.48
RAD21-209ENST00000523547 PEG3Q9GZU2 1588 aa43.03■■■■■ 4.48
RAD21-209ENST00000523547 BAZ1BQ9UIG0 1483 aaKnown RBP43■■■■■ 4.47
RAD21-209ENST00000523547 ERCC6Q03468 1493 aa42.62■■■■■ 4.41
RAD21-209ENST00000523547 NESP48681 1621 aa42.57■■■■■ 4.4
RAD21-209ENST00000523547 WIZO95785 1651 aa42.54■■■■■ 4.4
RAD21-209ENST00000523547 LAMC3Q9Y6N6 1575 aa42.37■■■■■ 4.37
RAD21-209ENST00000523547 RSF1Q96T23 1441 aaPredicted RBP42.37■■■■■ 4.37
RAD21-209ENST00000523547 CUX2O14529 1486 aa42.36■■■■■ 4.37
RAD21-209ENST00000523547 CADPSQ9ULU8 1353 aa42.17■■■■■ 4.34
RAD21-209ENST00000523547 PDS5BQ9NTI5 1447 aa42.14■■■■■ 4.34
RAD21-209ENST00000523547 TOP2AP11388 1531 aaKnown RBP42.06■■■■■ 4.32
RAD21-209ENST00000523547 KIF21AQ7Z4S6 1674 aa42.02■■■■■ 4.32
RAD21-209ENST00000523547 THOC2Q8NI27 1593 aaKnown RBP42.01■■■■■ 4.32
RAD21-209ENST00000523547 CFTRP13569 1480 aa41.78■■■■■ 4.28
RAD21-209ENST00000523547 DNAJC5Q9H3Z4 198 aa41.77■■■■■ 4.28
RAD21-209ENST00000523547 MRC2Q9UBG0 1479 aa41.72■■■■■ 4.27
RAD21-209ENST00000523547 FANCD2Q9BXW9 1451 aa41.66■■■■■ 4.26
RAD21-209ENST00000523547 CEP164Q9UPV0 1460 aa41.66■■■■■ 4.26
RAD21-209ENST00000523547 CCDC88BA6NC98 1476 aa41.6■■■■■ 4.25
RAD21-209ENST00000523547 WDR62O43379 1518 aa41.59■■■■■ 4.25
RAD21-209ENST00000523547 PRDM2Q13029 1718 aa41.37■■■■■ 4.21
RAD21-209ENST00000523547 URB2Q14146 1524 aaKnown RBP41.28■■■■■ 4.2
RAD21-209ENST00000523547 TOPBP1Q92547 1522 aa40.93■■■■■ 4.14
RAD21-209ENST00000523547 ABCC8Q09428 1581 aa40.91■■■■■ 4.14
RAD21-209ENST00000523547 SUPT5HO00267 1087 aaKnown RBP40.91■■■■■ 4.14
RAD21-209ENST00000523547 IFT140Q96RY7 1462 aa40.83■■■■■ 4.13
RAD21-209ENST00000523547 DNMBPQ6XZF7 1577 aa40.82■■■■■ 4.13
RAD21-209ENST00000523547 ZNF608Q9ULD9 1512 aaPredicted RBP40.68■■■■■ 4.1
RAD21-209ENST00000523547 OSCARQ8IYS5 282 aa40.56■■■■■ 4.08
RAD21-209ENST00000523547 POLA1P09884 1462 aaPredicted RBP40.55■■■■■ 4.08
RAD21-209ENST00000523547 TARBP1Q13395 1621 aaKnown RBP40.51■■■■■ 4.08
RAD21-209ENST00000523547 EIF4G3O43432 1585 aaKnown RBP40.47■■■■■ 4.07
RAD21-209ENST00000523547 CUX1P39880 1505 aa40.42■■■■■ 4.06
RAD21-209ENST00000523547 AQRO60306 1485 aaKnown RBP eCLIP40.4■■■■■ 4.062e-7■■■□□ 15
RAD21-209ENST00000523547 SOGA1O94964 1423 aa40.4■■■■■ 4.06
RAD21-209ENST00000523547 RAD54L2Q9Y4B4 1467 aa40.39■■■■■ 4.06
RAD21-209ENST00000523547 FGD5Q6ZNL6 1462 aa40.37■■■■■ 4.05
RAD21-209ENST00000523547 TDRD9Q8NDG6 1382 aaKnown RBP40.24■■■■■ 4.03
RAD21-209ENST00000523547 WDR97A6NE52 1622 aa40.16■■■■■ 4.02
RAD21-209ENST00000523547 TRIM41Q8WV44 630 aa40.15■■■■■ 4.02
RAD21-209ENST00000523547 CHD1O14646 1710 aa40.07■■■■■ 4
RAD21-209ENST00000523547 FBLN2P98095 1184 aa40.06■■■■■ 4
RAD21-209ENST00000523547 SNAPC4Q5SXM2 1469 aa39.99■■■■□ 3.99
RAD21-209ENST00000523547 GRIN2BQ13224 1484 aa39.98■■■■□ 3.99
RAD21-209ENST00000523547 WRNQ14191 1432 aaPredicted RBP eCLIP39.97■■■■□ 3.99
RAD21-209ENST00000523547 ABCA10Q8WWZ4 1543 aa39.96■■■■□ 3.99
RAD21-209ENST00000523547 MAGI1Q96QZ7 1491 aaPredicted RBP39.93■■■■□ 3.98
RAD21-209ENST00000523547 GAPVD1Q14C86 1478 aa39.91■■■■□ 3.98
RAD21-209ENST00000523547 RIMBP3CA6NJZ7 1639 aa39.91■■■■□ 3.98
RAD21-209ENST00000523547 RIMBP3BA6NNM3 1639 aa39.91■■■■□ 3.98
RAD21-209ENST00000523547 TOP2BQ02880 1626 aa39.91■■■■□ 3.98
RAD21-209ENST00000523547 RIMBP3Q9UFD9 1639 aa39.91■■■■□ 3.98
RAD21-209ENST00000523547 BIVM-ERCC5R4GMW8 1640 aa39.89■■■■□ 3.98
RAD21-209ENST00000523547 SYNJ1O43426 1573 aa39.87■■■■□ 3.97
RAD21-209ENST00000523547 CHMP7Q8WUX9 453 aaPredicted RBP39.86■■■■□ 3.97
RAD21-209ENST00000523547 ARHGEF11O15085 1522 aa39.85■■■■□ 3.97
RAD21-209ENST00000523547 ABCA5Q8WWZ7 1642 aa39.81■■■■□ 3.96
RAD21-209ENST00000523547 PBRM1Q86U86 1689 aa39.81■■■■□ 3.96
RAD21-209ENST00000523547 SYNJ2O15056 1496 aa39.78■■■■□ 3.96
RAD21-209ENST00000523547 CLASP1Q7Z460 1538 aa39.63■■■■□ 3.93
RAD21-209ENST00000523547 CYB5RLQ6IPT4 315 aa39.56■■■■□ 3.92
RAD21-209ENST00000523547 ARAP1Q96P48 1450 aa39.49■■■■□ 3.91
RAD21-209ENST00000523547 ADAMTS12P58397 1594 aa39.48■■■■□ 3.91
RAD21-209ENST00000523547 ERICH3Q5RHP9 1530 aa39.46■■■■□ 3.91
RAD21-209ENST00000523547 GRIN2AQ12879 1464 aa39.45■■■■□ 3.91
RAD21-209ENST00000523547 FHAD1B1AJZ9 1412 aa39.43■■■■□ 3.9
RAD21-209ENST00000523547 NUP160Q12769 1436 aa39.31■■■■□ 3.88
RAD21-209ENST00000523547 CEP170Q5SW79 1584 aa39.26■■■■□ 3.88
RAD21-209ENST00000523547 KIF27Q86VH2 1401 aa39.18■■■■□ 3.86
RAD21-209ENST00000523547 IGF1RP08069 1367 aa39.1■■■■□ 3.85
RAD21-209ENST00000523547 SHROOM2Q13796 1616 aa39.05■■■■□ 3.84
RAD21-209ENST00000523547 ERCC6L2Q5T890 1561 aa39.04■■■■□ 3.84
RAD21-209ENST00000523547 CUL7Q14999 1698 aa38.97■■■■□ 3.83
RAD21-209ENST00000523547 TRHP20396 242 aaPredicted RBP38.96■■■■□ 3.83
RAD21-209ENST00000523547 JPH4Q96JJ6 628 aa38.94■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms