Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 MIR663A-201ENST00000385250 93 ntBASIC16.82■□□□□ 0.28
VGLL3A8MV65 NCF1B-203ENST00000435988 1254 ntBASIC16.82■□□□□ 0.28
VGLL3A8MV65 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 AC005181.1-201ENST00000604782 1256 ntBASIC16.82■□□□□ 0.28
VGLL3A8MV65 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VGLL3A8MV65 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VGLL3A8MV65 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.81■□□□□ 0.28
VGLL3A8MV65 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 CICP16-201ENST00000502609 2813 ntBASIC16.81■□□□□ 0.28
VGLL3A8MV65 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.81■□□□□ 0.28
VGLL3A8MV65 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VGLL3A8MV65 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 AC133552.2-202ENST00000575694 574 ntBASIC16.8■□□□□ 0.28
VGLL3A8MV65 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VGLL3A8MV65 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
VGLL3A8MV65 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL3A8MV65 AC067930.6-201ENST00000623257 4947 ntBASIC16.79■□□□□ 0.28
VGLL3A8MV65 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL3A8MV65 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VGLL3A8MV65 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.79■□□□□ 0.28
VGLL3A8MV65 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL3A8MV65 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VGLL3A8MV65 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VGLL3A8MV65 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
VGLL3A8MV65 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL3A8MV65 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
VGLL3A8MV65 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VGLL3A8MV65 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms