Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 KRT8P10-201ENST00000450021 1447 ntBASIC19.19■□□□□ 0.66
CBX8Q9HC52 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 STARP1-201ENST00000397973 869 ntBASIC19.19■□□□□ 0.66
CBX8Q9HC52 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.19■□□□□ 0.66
CBX8Q9HC52 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 AC093827.2-201ENST00000512654 315 ntBASIC19.19■□□□□ 0.66
CBX8Q9HC52 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 STK25P1-201ENST00000585406 838 ntBASIC19.19■□□□□ 0.66
CBX8Q9HC52 AC005332.3-201ENST00000589904 676 ntBASIC19.19■□□□□ 0.66
CBX8Q9HC52 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.19■□□□□ 0.66
CBX8Q9HC52 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 AC103702.1-201ENST00000548801 2630 ntBASIC19.19■□□□□ 0.66
CBX8Q9HC52 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX8Q9HC52 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 CROCCP1-201ENST00000426910 5675 ntBASIC19.18■□□□□ 0.66
CBX8Q9HC52 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 GPR89P-201ENST00000407924 1495 ntBASIC19.18■□□□□ 0.66
CBX8Q9HC52 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 AL390719.2-201ENST00000606993 987 ntBASIC19.18■□□□□ 0.66
CBX8Q9HC52 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 AC066615.1-201ENST00000640911 628 ntBASIC19.18■□□□□ 0.66
CBX8Q9HC52 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX8Q9HC52 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX8Q9HC52 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 SLC25A3P1-201ENST00000443844 931 ntBASIC19.17■□□□□ 0.66
CBX8Q9HC52 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 MIR4497-201ENST00000583208 89 ntBASIC19.17■□□□□ 0.66
CBX8Q9HC52 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 KRT18P22-201ENST00000402024 1347 ntBASIC19.17■□□□□ 0.66
CBX8Q9HC52 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.17■□□□□ 0.66
CBX8Q9HC52 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX8Q9HC52 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms