Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.79□□□□□ -0.2
UPK2O00526 KRT18P21-201ENST00000515767 1272 ntBASIC13.79□□□□□ -0.2
UPK2O00526 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.79□□□□□ -0.2
UPK2O00526 TPSP2-201ENST00000561760 610 ntBASIC13.79□□□□□ -0.2
UPK2O00526 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UPK2O00526 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
UPK2O00526 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.79□□□□□ -0.2
UPK2O00526 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.79□□□□□ -0.2
UPK2O00526 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK2O00526 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK2O00526 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK2O00526 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
UPK2O00526 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.79□□□□□ -0.2
UPK2O00526 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK2O00526 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK2O00526 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
UPK2O00526 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UPK2O00526 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK2O00526 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UPK2O00526 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
UPK2O00526 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 SIGLEC30P-201ENST00000455569 941 ntBASIC13.78□□□□□ -0.2
UPK2O00526 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.78□□□□□ -0.2
UPK2O00526 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK2O00526 TOB2P1-201ENST00000469761 992 ntBASIC13.78□□□□□ -0.2
UPK2O00526 AC096582.2-201ENST00000510860 516 ntBASIC13.78□□□□□ -0.2
UPK2O00526 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK2O00526 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK2O00526 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UPK2O00526 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 NSUN5P1-202ENST00000421140 1535 ntBASIC13.78□□□□□ -0.2
UPK2O00526 NSUN5P2-203ENST00000457352 1529 ntBASIC13.78□□□□□ -0.2
UPK2O00526 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 PMPCAP1-201ENST00000508114 1576 ntBASIC13.78□□□□□ -0.2
UPK2O00526 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK2O00526 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UPK2O00526 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UPK2O00526 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
UPK2O00526 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK2O00526 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
UPK2O00526 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK2O00526 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK2O00526 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK2O00526 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK2O00526 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
UPK2O00526 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK2O00526 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK2O00526 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UPK2O00526 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms