RNA–Protein interactions for RNA: ENST00000463584.1

PFDN6-206, Transcript of prefoldin subunit 6, humanhuman

TSL 3 BASIC

Gene PFDN6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-206ENST00000463584 NISCHQ9Y2I1 1504 aa46.01■■■■■ 4.96
PFDN6-206ENST00000463584 CCDC180Q9P1Z9 1646 aa41.31■■■■■ 4.2
PFDN6-206ENST00000463584 ABCC9O60706 1549 aa41.17■■■■■ 4.18
PFDN6-206ENST00000463584 RB1CC1Q8TDY2 1594 aa39.26■■■■□ 3.88
PFDN6-206ENST00000463584 NACADO15069 1562 aa39■■■■□ 3.83
PFDN6-206ENST00000463584 DCAF8L2P0C7V8 631 aa38.77■■■■□ 3.8
PFDN6-206ENST00000463584 MYO15BQ96JP2 1530 aa38.47■■■■□ 3.75
PFDN6-206ENST00000463584 DNAJC5BQ9UF47 199 aa38.42■■■■□ 3.74
PFDN6-206ENST00000463584 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
PFDN6-206ENST00000463584 PABPN1Q86U42 306 aaKnown RBP eCLIP38.29■■■■□ 3.72
PFDN6-206ENST00000463584 ZCCHC6Q5VYS8 1495 aaKnown RBP38.17■■■■□ 3.7
PFDN6-206ENST00000463584 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
PFDN6-206ENST00000463584 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
PFDN6-206ENST00000463584 SCRIBQ14160 1630 aa37.64■■■■□ 3.62
PFDN6-206ENST00000463584 SHROOM4Q9ULL8 1493 aa37.62■■■■□ 3.61
PFDN6-206ENST00000463584 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
PFDN6-206ENST00000463584 EIF4G1Q04637 1599 aaKnown RBP37.15■■■■□ 3.54
PFDN6-206ENST00000463584 CECR2Q9BXF3 1484 aa37.08■■■■□ 3.53
PFDN6-206ENST00000463584 NCAPD3P42695 1498 aa35.95■■■■□ 3.35
PFDN6-206ENST00000463584 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
PFDN6-206ENST00000463584 ATAD2BQ9ULI0 1458 aa35.87■■■■□ 3.33
PFDN6-206ENST00000463584 SMARCA2P51531 1590 aa35.83■■■■□ 3.33
PFDN6-206ENST00000463584 HMGXB3Q12766 1538 aa35.76■■■■□ 3.31
PFDN6-206ENST00000463584 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
PFDN6-206ENST00000463584 ERCC6Q03468 1493 aa35.58■■■■□ 3.29
PFDN6-206ENST00000463584 BAZ1BQ9UIG0 1483 aaKnown RBP35.58■■■■□ 3.29
PFDN6-206ENST00000463584 PEG3Q9GZU2 1588 aa35.54■■■■□ 3.28
PFDN6-206ENST00000463584 CUX2O14529 1486 aa35.45■■■■□ 3.27
PFDN6-206ENST00000463584 MROH2BQ7Z745 1585 aa35.45■■■■□ 3.26
PFDN6-206ENST00000463584 NESP48681 1621 aa35.37■■■■□ 3.25
PFDN6-206ENST00000463584 DNAJC5Q9H3Z4 198 aa35.24■■■■□ 3.23
PFDN6-206ENST00000463584 LAMC3Q9Y6N6 1575 aa35.18■■■■□ 3.22
PFDN6-206ENST00000463584 WIZO95785 1651 aa35.05■■■■□ 3.2
PFDN6-206ENST00000463584 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
PFDN6-206ENST00000463584 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
PFDN6-206ENST00000463584 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
PFDN6-206ENST00000463584 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
PFDN6-206ENST00000463584 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
PFDN6-206ENST00000463584 MRC2Q9UBG0 1479 aa34.67■■■■□ 3.14
PFDN6-206ENST00000463584 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
PFDN6-206ENST00000463584 WDR62O43379 1518 aa34.58■■■■□ 3.13
PFDN6-206ENST00000463584 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
PFDN6-206ENST00000463584 CFTRP13569 1480 aa34.51■■■■□ 3.11
PFDN6-206ENST00000463584 FANCD2Q9BXW9 1451 aa34.51■■■■□ 3.11
PFDN6-206ENST00000463584 PRDM2Q13029 1718 aa34.26■■■■□ 3.07
PFDN6-206ENST00000463584 URB2Q14146 1524 aaKnown RBP34.21■■■■□ 3.07
PFDN6-206ENST00000463584 CCDC88BA6NC98 1476 aa34.19■■■■□ 3.06
PFDN6-206ENST00000463584 TOPBP1Q92547 1522 aa33.86■■■■□ 3.01
PFDN6-206ENST00000463584 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
PFDN6-206ENST00000463584 ABCC8Q09428 1581 aa33.81■■■■□ 3
PFDN6-206ENST00000463584 OSCARQ8IYS5 282 aa33.8■■■■□ 3
PFDN6-206ENST00000463584 TRIM41Q8WV44 630 aa33.79■■■■□ 3
PFDN6-206ENST00000463584 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
PFDN6-206ENST00000463584 ZNF608Q9ULD9 1512 aaPredicted RBP33.76■■■■□ 3
PFDN6-206ENST00000463584 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
PFDN6-206ENST00000463584 TARBP1Q13395 1621 aaKnown RBP33.56■■■□□ 2.96
PFDN6-206ENST00000463584 POLA1P09884 1462 aaPredicted RBP33.53■■■□□ 2.96
PFDN6-206ENST00000463584 AQRO60306 1485 aaKnown RBP eCLIP33.46■■■□□ 2.95
PFDN6-206ENST00000463584 RIMBP3CA6NJZ7 1639 aa33.41■■■□□ 2.94
PFDN6-206ENST00000463584 RIMBP3BA6NNM3 1639 aa33.41■■■□□ 2.94
PFDN6-206ENST00000463584 RIMBP3Q9UFD9 1639 aa33.41■■■□□ 2.94
PFDN6-206ENST00000463584 RAD54L2Q9Y4B4 1467 aa33.38■■■□□ 2.93
PFDN6-206ENST00000463584 CHD1O14646 1710 aa33.38■■■□□ 2.93
PFDN6-206ENST00000463584 SOGA1O94964 1423 aa33.35■■■□□ 2.93
PFDN6-206ENST00000463584 FGD5Q6ZNL6 1462 aa33.34■■■□□ 2.93
PFDN6-206ENST00000463584 CUX1P39880 1505 aa33.31■■■□□ 2.92
PFDN6-206ENST00000463584 ARHGEF11O15085 1522 aa33.31■■■□□ 2.92
PFDN6-206ENST00000463584 SUPT5HO00267 1087 aaKnown RBP33.28■■■□□ 2.92
PFDN6-206ENST00000463584 TDRD9Q8NDG6 1382 aaKnown RBP33.27■■■□□ 2.92
PFDN6-206ENST00000463584 WDR97A6NE52 1622 aa33.26■■■□□ 2.91
PFDN6-206ENST00000463584 FBLN2P98095 1184 aa33.24■■■□□ 2.91
PFDN6-206ENST00000463584 SNAPC4Q5SXM2 1469 aa33.16■■■□□ 2.9
PFDN6-206ENST00000463584 GRIN2BQ13224 1484 aa33.08■■■□□ 2.89
PFDN6-206ENST00000463584 MAGI1Q96QZ7 1491 aaPredicted RBP33.08■■■□□ 2.89
PFDN6-206ENST00000463584 CYB5RLQ6IPT4 315 aa33.01■■■□□ 2.88
PFDN6-206ENST00000463584 PBRM1Q86U86 1689 aa33.01■■■□□ 2.87
PFDN6-206ENST00000463584 CHMP7Q8WUX9 453 aaPredicted RBP33■■■□□ 2.87
PFDN6-206ENST00000463584 SYNJ1O43426 1573 aa32.98■■■□□ 2.87
PFDN6-206ENST00000463584 GAPVD1Q14C86 1478 aa32.97■■■□□ 2.87
PFDN6-206ENST00000463584 ARAP1Q96P48 1450 aa32.97■■■□□ 2.87
PFDN6-206ENST00000463584 SYNJ2O15056 1496 aa32.97■■■□□ 2.87
PFDN6-206ENST00000463584 CLASP1Q7Z460 1538 aa32.96■■■□□ 2.87
PFDN6-206ENST00000463584 ABCA10Q8WWZ4 1543 aa32.95■■■□□ 2.87
PFDN6-206ENST00000463584 ABCA5Q8WWZ7 1642 aa32.93■■■□□ 2.86
PFDN6-206ENST00000463584 WRNQ14191 1432 aaPredicted RBP eCLIP32.84■■■□□ 2.85
PFDN6-206ENST00000463584 BIVM-ERCC5R4GMW8 1640 aa32.84■■■□□ 2.85
PFDN6-206ENST00000463584 TOP2BQ02880 1626 aa32.82■■■□□ 2.84
PFDN6-206ENST00000463584 ADAMTS12P58397 1594 aa32.69■■■□□ 2.82
PFDN6-206ENST00000463584 GRIN2AQ12879 1464 aa32.66■■■□□ 2.82
PFDN6-206ENST00000463584 TRHP20396 242 aaPredicted RBP32.64■■■□□ 2.82
PFDN6-206ENST00000463584 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
PFDN6-206ENST00000463584 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
PFDN6-206ENST00000463584 CEP170Q5SW79 1584 aa32.54■■■□□ 2.8
PFDN6-206ENST00000463584 NUP160Q12769 1436 aa32.52■■■□□ 2.8
PFDN6-206ENST00000463584 ERCC6L2Q5T890 1561 aa32.43■■■□□ 2.78
PFDN6-206ENST00000463584 SHROOM2Q13796 1616 aa32.4■■■□□ 2.78
PFDN6-206ENST00000463584 RUSC2Q8N2Y8 1516 aa32.23■■■□□ 2.75
PFDN6-206ENST00000463584 PRG4Q92954 1404 aaPredicted RBP32.21■■■□□ 2.75
PFDN6-206ENST00000463584 KIF27Q86VH2 1401 aa32.18■■■□□ 2.74
PFDN6-206ENST00000463584 JPH4Q96JJ6 628 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms