Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GCM1Q9NP62 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GCM1Q9NP62 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GCM1Q9NP62 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
GCM1Q9NP62 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
GCM1Q9NP62 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCM1Q9NP62 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GCM1Q9NP62 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.56■□□□□ 0.88
GCM1Q9NP62 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
GCM1Q9NP62 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
GCM1Q9NP62 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.56■□□□□ 0.88
GCM1Q9NP62 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCM1Q9NP62 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCM1Q9NP62 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCM1Q9NP62 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCM1Q9NP62 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCM1Q9NP62 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCM1Q9NP62 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCM1Q9NP62 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.55■□□□□ 0.88
GCM1Q9NP62 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCM1Q9NP62 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.54■□□□□ 0.88
GCM1Q9NP62 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.54■□□□□ 0.88
GCM1Q9NP62 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.54■□□□□ 0.88
GCM1Q9NP62 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCM1Q9NP62 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCM1Q9NP62 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
GCM1Q9NP62 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCM1Q9NP62 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GCM1Q9NP62 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCM1Q9NP62 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
GCM1Q9NP62 AL592293.1-201ENST00000502889 1188 ntBASIC20.52■□□□□ 0.88
GCM1Q9NP62 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCM1Q9NP62 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCM1Q9NP62 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCM1Q9NP62 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCM1Q9NP62 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GCM1Q9NP62 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCM1Q9NP62 KRT18P60-201ENST00000312876 1297 ntBASIC20.51■□□□□ 0.87
GCM1Q9NP62 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.51■□□□□ 0.87
GCM1Q9NP62 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GCM1Q9NP62 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCM1Q9NP62 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.51■□□□□ 0.87
GCM1Q9NP62 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCM1Q9NP62 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.5■□□□□ 0.87
GCM1Q9NP62 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCM1Q9NP62 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GCM1Q9NP62 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCM1Q9NP62 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.5■□□□□ 0.87
GCM1Q9NP62 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCM1Q9NP62 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.49■□□□□ 0.87
GCM1Q9NP62 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GCM1Q9NP62 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GCM1Q9NP62 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.49■□□□□ 0.87
GCM1Q9NP62 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GCM1Q9NP62 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GCM1Q9NP62 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GCM1Q9NP62 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GCM1Q9NP62 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.49■□□□□ 0.87
GCM1Q9NP62 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.49■□□□□ 0.87
GCM1Q9NP62 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GCM1Q9NP62 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GCM1Q9NP62 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCM1Q9NP62 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GCM1Q9NP62 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GCM1Q9NP62 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GCM1Q9NP62 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.47■□□□□ 0.87
GCM1Q9NP62 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
GCM1Q9NP62 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GCM1Q9NP62 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GCM1Q9NP62 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GCM1Q9NP62 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GCM1Q9NP62 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.47■□□□□ 0.87
GCM1Q9NP62 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GCM1Q9NP62 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GCM1Q9NP62 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.46■□□□□ 0.87
GCM1Q9NP62 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GCM1Q9NP62 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GCM1Q9NP62 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GCM1Q9NP62 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GCM1Q9NP62 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GCM1Q9NP62 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.45■□□□□ 0.86
GCM1Q9NP62 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GCM1Q9NP62 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GCM1Q9NP62 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.45■□□□□ 0.86
GCM1Q9NP62 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
GCM1Q9NP62 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GCM1Q9NP62 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GCM1Q9NP62 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
GCM1Q9NP62 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.45■□□□□ 0.86
GCM1Q9NP62 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GCM1Q9NP62 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GCM1Q9NP62 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GCM1Q9NP62 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms